RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SS18	Q15532	418 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	YIPF7	Q8N8F6	280 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	RNASE11	Q8TAA1	199 aa	Known RBP	1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	TMIGD2	Q96BF3	282 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	DNAJC30	Q96LL9	226 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	EBNA1BP2	Q99848	306 aa	Known RBP	1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	C1QTNF6	Q9BXI9	259 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	CXCL16	Q9H2A7	254 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	DSCAML1	Q8TD84	2053 aa		1.49	□□□□□ -2.17
RAP1B-231	ENST00000544639	PRRC2B	Q5JSZ5	2229 aa	Known RBP	1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	ATAD5	Q96QE3	1844 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639		A0A0J9YX75	114 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	ZNF879	B4DU55	563 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	TNFAIP8	O95379	198 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	RAB36	O95755	333 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	LIMS3	P0CW19	117 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	LIMS4	P0CW20	117 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	IGHV3-30-3	P0DP02	117 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	NQO1	P15559	274 aa	Known RBP	1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	RCVRN	P35243	200 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	SPAM1	P38567	509 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	MAGEA6	P43360	314 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	ZNF140	P52738	457 aa	Predicted RBP	1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	AKR1C2	P52895	323 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	ZNF117	Q03924	483 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	CENPW	Q5EE01	88 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	C2orf73	Q8N5S3	287 aa	Predicted RBP	1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	OR4P4	Q8NGL7	312 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	FAM210A	Q96ND0	272 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	KRTAP4-1	Q9BYQ7	146 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	GTSF1L	Q9H1H1	148 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	SMDT1	Q9H4I9	107 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	MINOS1-NBL1	R4GNA1	71 aa		1.48	□□□□□ -2.17
RAP1B-231	ENST00000544639	ARHGAP32	A7KAX9	2087 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	KIAA0232	Q92628	1395 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	SLIT2	O94813	1529 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	ERICH4	A6NGS2	130 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	PHYH	O14832	338 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	UGT2B11	O75310	529 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	BRI3	O95415	125 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	GADD45A	P24522	165 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	OR2B6	P58173	313 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	FAM3A	P98173	230 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	GTF2B	Q00403	316 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	HES1	Q14469	280 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	MAPK14	Q16539	360 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	TIMM23B	Q5SRD1	257 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	OR5K1	Q8NHB7	308 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	ERMN	Q8TAM6	284 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	CYTH2	Q99418	400 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	ZNF251	Q9BRH9	671 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	UPK3B	Q9BT76	320 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	CHST5	Q9GZS9	411 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	C16orf95	Q9H693	158 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	COMMD9	Q9P000	198 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	TMEM216	Q9P0N5	145 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639	GBF1	Q92538	1859 aa		1.47	□□□□□ -2.17
RAP1B-231	ENST00000544639		A0A1W2PQL4	384 aa	Predicted RBP	1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	SULT1C2	O00338	296 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	CYTH3	O43739	400 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	SOD1	P00441	154 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	SULT1A2	P50226	295 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	HADHB	P55084	474 aa	Known RBP	1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	RWDD2B	P57060	319 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	PDK2	Q15119	407 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	DOLPP1	Q86YN1	238 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	TMEM56	Q96MV1	263 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	UGT2B28	Q9BY64	529 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	SLC19A3	Q9BZV2	496 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	FAM206A	Q9NX38	181 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	FIS1	Q9Y3D6	152 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	DNMT1	P26358	1616 aa	Known RBP	1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	COL4A2	P08572	1712 aa		1.46	□□□□□ -2.18
RAP1B-231	ENST00000544639	PTPRJ	Q12913	1337 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	STRCP1	A6NGW2	1772 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	MDC1	Q14676	2089 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	MUC21	A0A0G2JKD1	596 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	MUC21	A0A140T8X8	626 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	TRAPPC3	O43617	180 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	PRB1	P04280	392 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	SYT1	P21579	422 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	PPP1CC	P36873	323 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	LPAR6	P43657	344 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	PSMB3	P49720	205 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	MRPL51	Q4U2R6	128 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	TRMT12	Q53H54	448 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	RBM48	Q5RL73	367 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	SPERT	Q8NA61	448 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	TAMM41	Q96BW9	452 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	TXNL4B	Q9NX01	149 aa	Known RBP	1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	FBXL3	Q9UKT7	428 aa		1.45	□□□□□ -2.18
RAP1B-231	ENST00000544639	VPS37C	A5D8V6	355 aa	Predicted RBP	1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	FNDC10	F2Z333	226 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639		H3BRN7	92 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639		K7ERQ8	282 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	MPZL2	O60487	215 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	PSMD7	P51665	324 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	RAB8A	P61006	207 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	SLC35A2	P78381	396 aa		1.44	□□□□□ -2.18
RAP1B-231	ENST00000544639	SYCP1	Q15431	976 aa		1.44	□□□□□ -2.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms