RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TAS2R41P59536 307 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 SKP2Q13309 424 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 HIST3H3Q16695 136 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 CLEC12BQ2HXU8 276 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 HLA-DRB5Q30154 266 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 CDNFQ49AH0 187 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GUSBP11Q6P575 273 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 OLIG3Q7RTU3 272 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GGNQ86UU5 652 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 PPP1R27Q86WC6 154 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 LRRC28Q86X40 367 aaPredicted RBP4.4□□□□□ -1.71
DDB1-219ENST00000541513 C10orf107Q8IVU9 208 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 SLC34A3Q8N130 599 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GAPTQ8N292 157 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GATD1Q8NB37 220 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 DEFB124Q8NES8 71 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 BEST4Q8NFU0 473 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 C16orf52Q8NHV5 167 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 DCAKDQ8WVC6 231 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 PATE1Q8WXA2 126 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GHSRQ92847 366 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 NABP1Q96AH0 204 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 MED8Q96G25 268 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 MRAP2Q96G30 205 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 C18orf12Q96KH6 178 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 MAGEB18Q96M61 343 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 NUDT9Q9BW91 350 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
DDB1-219ENST00000541513 RBM38Q9H0Z9 239 aaKnown RBP4.4□□□□□ -1.71
DDB1-219ENST00000541513 LIME1Q9H400 295 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 MAP1LC3AQ9H492 121 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 WFDC1Q9HC57 220 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 OCIAD1Q9NX40 245 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 GLTPQ9NZD2 209 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 FBXO7Q9Y3I1 522 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 CHD8Q9HCK8 2581 aa4.4□□□□□ -1.71
DDB1-219ENST00000541513 APC2O95996 2303 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 FAM240AA0A1B0GVK7 77 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ISPDA4D126 451 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PRORSD1PA6NEY8 169 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 CCDC160A6NGH7 325 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ZNF726A6NNF4 738 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 F6UB75 175 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 G3V2L1 256 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 NTN3O00634 580 aaPredicted RBP4.39□□□□□ -1.71
DDB1-219ENST00000541513 CYB5BO43169 146 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 GGCTO75223 188 aaKnown RBP4.39□□□□□ -1.71
DDB1-219ENST00000541513 PIAS1O75925 651 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PDYNP01213 254 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 C8GP07360 202 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 TSPAN19P0C672 248 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 RBMY1CP0DJD4 496 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PGA4P0DJD7 388 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PGA3P0DJD8 388 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PGA5P0DJD9 388 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 CXCR1P25024 350 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 CD200P41217 278 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 MAP2K4P45985 399 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SULT1A1P50225 295 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SULT1A2P50226 295 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 PROK1P58294 105 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 RAP1AP62834 184 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ZNF630Q2M218 657 aaPredicted RBP4.39□□□□□ -1.71
DDB1-219ENST00000541513 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ACSBG2Q5FVE4 666 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 TIFABQ6ZNK6 161 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ZADH2Q8N4Q0 377 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SKA2Q8WVK7 121 aaPredicted RBP4.39□□□□□ -1.71
DDB1-219ENST00000541513 DDIT4LQ96D03 193 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SLC25A38Q96DW6 304 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ATXN7L3BQ96GX2 97 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SRXN1Q9BYN0 137 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 SELENOIQ9C0D9 397 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 TXNIPQ9H3M7 391 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 RASL12Q9NYN1 266 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 KCNIP1Q9NZI2 227 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 COMMD9Q9P000 198 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 VPREB3Q9UKI3 123 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 KCNE3Q9Y6H6 103 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 ANKRD11Q6UB99 2663 aaPredicted RBP4.39□□□□□ -1.71
DDB1-219ENST00000541513 FER1L5A0AVI2 2057 aa4.39□□□□□ -1.71
DDB1-219ENST00000541513 CCDC88CQ9P219 2028 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 IGHV3-38A0A0C4DH36 116 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 C15orf61A6NNL5 157 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 FAM220BPB1ANY3 271 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TRIM49D1C9J1S8 452 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 D6RAR5 112 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 S1PR2O95136 353 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 GPR75O95800 540 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 PTTG1O95997 202 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 SHBGP04278 402 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 SEMG1P04279 462 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 HPNP05981 417 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 BPGMP07738 259 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 MRPL3P09001 348 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms