RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LGALS4P56470 323 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 UBA52P62987 128 aaKnown RBP5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 HLA-DRB3P79483 266 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 BAMBIQ13145 260 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 GNMTQ14749 295 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 ARL6IP1Q15041 203 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 LTC4SQ16873 150 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 HLA-DRB5Q30154 266 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 ZNF260Q3ZCT1 412 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 Q3ZCU0 254 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 MINOS1Q5TGZ0 78 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 FAM53AQ6NSI3 398 aaPredicted RBP5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 RBMS3Q6XE24 437 aaKnown RBP5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 C5orf24Q7Z6I8 188 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 DYNAPQ8N1N2 210 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 SAMD12Q8N8I0 201 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 C8orf31Q8N9H6 132 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 ZNF439Q8NDP4 499 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 OR9G1Q8NH87 305 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 SETD6Q8TBK2 473 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 ZNF596Q8TC21 504 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 DYNC2LI1Q8TCX1 351 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 ACOT12Q8WYK0 555 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 LEAP2Q969E1 77 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 JMJD8Q96S16 334 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 MMP28Q9H239 520 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 Q9N2K0 584 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 RAB9BQ9NP90 201 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 KCNIP1Q9NZI2 227 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 CCDC59Q9P031 241 aaKnown RBP5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 JPT1Q9UK76 154 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 MGAT4AQ9UM21 535 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 PSG11Q9UQ72 335 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 FAM96BQ9Y3D0 163 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 POMT1Q9Y6A1 747 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 MINOS1-NBL1R4GNA1 71 aa5.65□□□□□ -1.5
LPCAT3-209ENST00000540060 COL6A5A8TX70 2615 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 A0A1W2PPE3 182 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 LY6LH3BQJ8 138 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 BUB1B-PAK6H3BSN5 160 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 SSX5O60225 188 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 IGHV3-7P01780 117 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 IGHV4-59P01825 116 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 APOA1P02647 267 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 RNASE1P07998 156 aaKnown RBP5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 ZNF182P17025 639 aaPredicted RBP5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 HTR1DP28221 377 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 IER3P46695 156 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 GNG10P50151 68 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 MRPS15P82914 257 aaKnown RBP5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 HTD2P86397 168 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 HERPUD1Q15011 391 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 SLC9A3R2Q15599 337 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 AANATQ16613 207 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 PNLIPRP3Q17RR3 467 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 CDNFQ49AH0 187 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 HACD4Q5VWC8 232 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 Q6ZS49 121 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 TMEM86BQ8N661 226 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 ZFAND2BQ8WV99 257 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 NUDCD2Q8WVJ2 157 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 SSMEM1Q8WWF3 244 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 AP3S1Q92572 193 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 PHF21AQ96BD5 680 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 GALMQ96C23 342 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 MALSU1Q96EH3 234 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 CMTM3Q96MX0 182 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 DUX5Q96PT3 197 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 MEGF9Q9H1U4 602 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 COMMD3Q9UBI1 195 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 GNG12Q9UBI6 72 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 STAB1Q9NY15 2570 aa5.64□□□□□ -1.51
LPCAT3-209ENST00000540060 TRAV18A0A075B6X5 111 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 IGKV1-6A0A0C4DH72 117 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 VGLL3A8MV65 326 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 LEUTXA8MZ59 168 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 TRDCB7Z8K6 153 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 H3BUX3 64 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 TRIM77I1YAP6 450 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 ZNF701M0R085 212 aaPredicted RBP5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 TOR1AO14656 332 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 SLC31A2O15432 143 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 XRCC3O43542 346 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 HPGDSO60760 199 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 DIRAS3O95661 229 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 SCTP09683 121 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 ELK1P19419 428 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 DTYMKP23919 212 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 SOX6P35712 828 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 PPP1CCP36873 323 aaKnown RBP5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 CEACAM3P40198 252 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 KIR2DS4P43632 304 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 ZNF134P52741 427 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 PRRX1P54821 245 aa5.63□□□□□ -1.51
LPCAT3-209ENST00000540060 TAS2R20P59543 309 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms