RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 TRAV27A0A087WT01 109 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 IRGMA1A4Y4 181 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 ZNF705FA8MVS1 300 aaPredicted RBP10.86□□□□□ -0.67
DDX55-206ENST00000539934 DCTN6O00399 190 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 UPK3AO75631 287 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 HAND1O96004 215 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
DDX55-206ENST00000539934 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
DDX55-206ENST00000539934 PGA4P0DJD7 388 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 CCL4P13236 92 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 KCNG3Q8TAE7 436 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 MARCH1Q8TCQ1 289 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 C20orf24Q9BUV8 137 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 Q9N2K0 584 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 MPDZO75970 2070 aa10.86□□□□□ -0.67
DDX55-206ENST00000539934 TRDV1A0A1B0GX56 115 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 K7EPK0 472 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 YPEL1O60688 119 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 ALOX12BO75342 701 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 SLC2A10O95528 541 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 NGFRP08138 427 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 FXYD6P3P58550 94 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 OC90Q02509 493 aaPredicted RBP10.85□□□□□ -0.67
DDX55-206ENST00000539934 TNXAQ16473 311 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 POU2AF1Q16633 256 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 FNDC7Q5VTL7 733 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 TOMM20LQ6UXN7 152 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 PNKDQ8N490 385 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 FAM71E2Q8N5Q1 922 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 OR52I1Q8NGK6 324 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 YPEL2Q96QA6 119 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 INPP5EQ9NRR6 644 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 SIGLEC7Q9Y286 467 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 ITPR3Q14573 2671 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 A0A1W2PR80 420 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 SOX2P48431 317 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 RAB40BQ12829 278 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 C1QL3Q5VWW1 255 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 CBLN3Q6UW01 205 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 LINC00114Q6XXX2 140 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 MEPCEQ7L2J0 689 aaKnown RBP10.85□□□□□ -0.67
DDX55-206ENST00000539934 ANKRD37Q7Z713 158 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 RNF152Q8N8N0 203 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 KISS1RQ969F8 398 aaPredicted RBP10.85□□□□□ -0.67
DDX55-206ENST00000539934 SPATA25Q9BR10 227 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 ULBP2Q9BZM5 246 aa10.85□□□□□ -0.67
DDX55-206ENST00000539934 SF3B6Q9Y3B4 125 aaKnown RBP10.85□□□□□ -0.67
DDX55-206ENST00000539934 CELSR1Q9NYQ6 3014 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 DNASE1L1P49184 302 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 HNRNPA3P51991 378 aaKnown RBP10.84□□□□□ -0.67
DDX55-206ENST00000539934 IL11RAQ14626 422 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
DDX55-206ENST00000539934 OLFML2AQ68BL7 652 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 C11orf87Q6NUJ2 197 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 OR52B4Q8NGK2 314 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 OR1B1Q8NGR6 318 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 OR2T27Q8NH04 317 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 ZNF563Q8TA94 476 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 SMDT1Q9H4I9 107 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 TRAPPC2LQ9UL33 140 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 FUT9Q9Y231 359 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 ADGRG4Q8IZF6 3080 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 ZNF891A8MT65 544 aaPredicted RBP10.84□□□□□ -0.67
DDX55-206ENST00000539934 MAS1P04201 325 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 GABRA5P31644 462 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 CFHR2P36980 270 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 HSD52Q0P140 79 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 PAQR6Q6TCH4 344 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 DTX1Q86Y01 620 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 HAVCR2Q8TDQ0 301 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 IMMP2LQ96T52 175 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 HINT3Q9NQE9 182 aaKnown RBP10.84□□□□□ -0.67
DDX55-206ENST00000539934 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
DDX55-206ENST00000539934 A1L4Q6 167 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 TMEM50AO95807 157 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 IGLC1P0CG04 106 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 GATA3P23771 443 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 HTR1FP30939 366 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 UQCRFS1P47985 274 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 Q6ZVH6 145 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 IL22RA1Q8N6P7 574 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 ZNF441Q8N8Z8 693 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 P2RX4Q99571 388 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 ICAM5Q9UMF0 924 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
DDX55-206ENST00000539934 TRBV24-1A0A075B6N3 115 aa10.82□□□□□ -0.68
DDX55-206ENST00000539934 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms