RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 IGKV1D-33P01593 117 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 IGKV1-33P01594 117 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 IGHV3-43DP0DP04 118 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 RCC1P18754 421 aaPredicted RBP9.19□□□□□ -0.94
RTN3-209ENST00000538995 CD1BP29016 333 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 VHLP40337 213 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 RPS25P62851 125 aaKnown RBP9.19□□□□□ -0.94
RTN3-209ENST00000538995 QRFPP83859 136 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 HTD2P86397 168 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 UNC119Q13432 240 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 NKAPLQ5M9Q1 402 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 LY6G6FQ5SQ64 297 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 CENPVQ7Z7K6 275 aaPredicted RBP9.19□□□□□ -0.94
RTN3-209ENST00000538995 OR4X2Q8NGF9 303 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 OR1L1Q8NH94 360 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 UBALD1Q8TB05 177 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 RTN4IP1Q8WWV3 396 aaPredicted RBP9.19□□□□□ -0.94
RTN3-209ENST00000538995 CNBD2Q96M20 576 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 URM1Q9BTM9 101 aaKnown RBP9.19□□□□□ -0.94
RTN3-209ENST00000538995 PRKDCP78527 4128 aaKnown RBP9.18□□□□□ -0.94
RTN3-209ENST00000538995 LANCL1O43813 399 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 MRPS14O60783 128 aaKnown RBP9.18□□□□□ -0.94
RTN3-209ENST00000538995 RGS11O94810 467 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 ARSBP15848 533 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 REG1BP48304 166 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 PSMD7P51665 324 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 GABARAPL2P60520 117 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 HMGN3Q15651 99 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 CT45A1Q5HYN5 189 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 OR10K2Q6IF99 312 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 PRR18Q8N4B5 295 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 Q8N6K4 173 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 OR8H1Q8NGG4 311 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 OR10V1Q8NGI7 309 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 OR2T10Q8NGZ9 312 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 CT45A3Q8NHU0 189 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 R3HDM4Q96D70 268 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 SULT4A1Q9BR01 284 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 ABHD14AQ9BUJ0 271 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 RIMS4Q9H426 269 aaPredicted RBP9.18□□□□□ -0.94
RTN3-209ENST00000538995 PLGRKTQ9HBL7 147 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 OR2S2Q9NQN1 319 aa9.18□□□□□ -0.94
RTN3-209ENST00000538995 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
RTN3-209ENST00000538995 SLC31A2O15432 143 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 YPEL1O60688 119 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 ATP6V1G2O95670 118 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 NAPSAO96009 420 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 MOSP00540 346 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 CALRP27797 417 aaKnown RBP9.17□□□□□ -0.94
RTN3-209ENST00000538995 MAP2K4P45985 399 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 ZNF134P52741 427 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 FABP5Q01469 135 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 RAB11BQ15907 218 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 MORN2Q502X0 79 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
RTN3-209ENST00000538995 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 HIST2H2BDQ6DRA6 164 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 C6orf201Q7Z4U5 140 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 LYG1Q8N1E2 194 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 FAM89BQ8N5H3 189 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 CHPT1Q8WUD6 406 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 GALMQ96C23 342 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
RTN3-209ENST00000538995 YPEL2Q96QA6 119 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 GFI1Q99684 422 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 NICN1Q9BSH3 213 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 LPAR5Q9H1C0 372 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 Q9H521 79 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
RTN3-209ENST00000538995 PLEKHJ1Q9NW61 149 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 ABRACLQ9P1F3 81 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 MGAT4AQ9UM21 535 aa9.17□□□□□ -0.94
RTN3-209ENST00000538995 A0A0A6YYD4 124 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 TRBV6-6A0A0A6YYG2 114 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 PSMB11A5LHX3 300 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
RTN3-209ENST00000538995 IGHG2P01859 326 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 GALP22466 123 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 BLVRBP30043 206 aaPredicted RBP9.16□□□□□ -0.94
RTN3-209ENST00000538995 HNF4GQ14541 408 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 P2RY14Q15391 338 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 FAM53AQ6NSI3 398 aaPredicted RBP9.16□□□□□ -0.94
RTN3-209ENST00000538995 ZNF880Q6PDB4 577 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 CD200R1LQ6Q8B3 271 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 COMMD1Q8N668 190 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 FAAP24Q9BTP7 215 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 KCNK15Q9H427 330 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 NDUFB11Q9NX14 153 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 HSF4Q9ULV5 492 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms