RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 MEIS3P1A6NDR6 274 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 GABARAPH6UMI1 98 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 SULT1C2O00338 296 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 HLA-DQB1P01920 261 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 CSN2P05814 226 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 MMP9P14780 707 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 GLP1RP43220 463 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 SLC35E4Q6ICL7 350 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 MOB1BQ7L9L4 216 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 Q8N402 240 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 TPRX1Q8N7U7 411 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 CFHR4Q92496 578 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 ELF5Q9UKW6 265 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-208ENST00000538933 TRGV10A0A0A0MS01 117 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 hADV38S2A0JD32 116 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 K7EIL1 84 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 CTDSPLO15194 276 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 RBBP9O75884 186 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 FCER2P06734 321 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ERP29P30040 261 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 P2RX3P56373 397 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ACTBP60709 375 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 DGCR2P98153 550 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 HERPUD1Q15011 391 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 RSBN1Q5VWQ0 802 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 CD276Q5ZPR3 534 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 WDR25Q64LD2 544 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ZNF841Q6ZN19 808 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ZNF497Q6ZNH5 498 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 GDPD1Q8N9F7 314 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ZNF565Q8N9K5 539 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 OR52I2Q8NH67 350 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ABHD1Q96SE0 405 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ST6GALNAC5Q9BVH7 336 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 SRRQ9GZT4 340 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 ZNF286AQ9HBT8 521 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 RAB9BQ9NP90 201 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 MGAT4AQ9UM21 535 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 KCNK7Q9Y2U2 307 aa10.15□□□□□ -0.78
CLSTN3-208ENST00000538933 TRBV23-1A0A0A0MS06 115 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 ODAMA1E959 279 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 MEIOCA2RUB1 952 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 C22orf46C9J442 243 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 ECDO95905 644 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 MT-ND4P03905 459 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 FCGR3AP08637 254 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 GSTT2BP0CG30 244 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 DTYMKP23919 212 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 CD40LGP29965 261 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 RCVRNP35243 200 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 GLIPR1P48060 266 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 PPP5CP53041 499 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 ARPC4P59998 168 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 RPL31P62899 125 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF79Q15937 498 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 C6orf183Q5T699 404 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF57Q68EA5 555 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 TRAT1Q6PIZ9 186 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 BTN2A1Q7KYR7 527 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 FGFRL1Q8N441 504 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 MFSD4AQ8N468 514 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 COQ2Q96H96 371 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 SOSTQ9BQB4 213 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 PCGF1Q9BSM1 259 aa10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 THAP7Q9BT49 309 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-208ENST00000538933 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 GSTZ1O43708 216 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 AP3S2P59780 193 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 SSBP1Q04837 148 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 PRR18Q8N4B5 295 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 TOMM5Q8N4H5 51 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 BEST4Q8NFU0 473 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 MRPL30Q8TCC3 161 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 MRGPRDQ8TDS7 321 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 GPX8Q8TED1 209 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 MAFIPQ8WZ33 124 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 CYYR1Q96J86 154 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 DCTN5Q9BTE1 182 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 CCDC32Q9BV29 185 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 ABCB10Q9NRK6 738 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 TAS2R8Q9NYW2 309 aa10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-208ENST00000538933 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 MEX3AA1L020 520 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms