RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RPUSD1Q9UJJ7 312 aaKnown RBP6.01□□□□□ -1.45
MSH6-209ENST00000538136 A0A0G2JK05 382 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 FAM181BA6NEQ2 426 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 TMEM210A6NLX4 147 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 IFNA21P01568 189 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 UBBP0CG47 229 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 IAPPP10997 89 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 PCMT1P22061 227 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 SAA4P35542 130 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 ACTBP60709 375 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 LINC01356Q8N9X3 169 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 RASL11BQ9BPW5 248 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 COMMD5Q9GZQ3 224 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 MMP27Q9H306 513 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 FBXL15Q9H469 300 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 NBPF19A0A087WUL8 3843 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 SVEP1Q4LDE5 3571 aa6□□□□□ -1.45
MSH6-209ENST00000538136 ANKRD34BA5PLL1 514 aa6□□□□□ -1.45
MSH6-209ENST00000538136 C12orf77C9JDV5 145 aa6□□□□□ -1.45
MSH6-209ENST00000538136 TSPAN4O14817 238 aa6□□□□□ -1.45
MSH6-209ENST00000538136 MUC1P15941 1255 aaPredicted RBP6□□□□□ -1.45
MSH6-209ENST00000538136 ANXA7P20073 488 aaKnown RBP6□□□□□ -1.45
MSH6-209ENST00000538136 TMBIM6P55061 237 aa6□□□□□ -1.45
MSH6-209ENST00000538136 P2RX3P56373 397 aa6□□□□□ -1.45
MSH6-209ENST00000538136 TFF3Q07654 80 aa6□□□□□ -1.45
MSH6-209ENST00000538136 KCNMB1Q16558 191 aa6□□□□□ -1.45
MSH6-209ENST00000538136 STEAP3Q658P3 488 aa6□□□□□ -1.45
MSH6-209ENST00000538136 TMEM200BQ69YZ2 307 aa6□□□□□ -1.45
MSH6-209ENST00000538136 GSG1LQ6UXU4 331 aa6□□□□□ -1.45
MSH6-209ENST00000538136 WFDC3Q8IUB2 231 aa6□□□□□ -1.45
MSH6-209ENST00000538136 SGPP2Q8IWX5 399 aa6□□□□□ -1.45
MSH6-209ENST00000538136 SNX22Q96L94 193 aa6□□□□□ -1.45
MSH6-209ENST00000538136 HARBI1Q96MB7 349 aa6□□□□□ -1.45
MSH6-209ENST00000538136 LPAR5Q9H1C0 372 aa6□□□□□ -1.45
MSH6-209ENST00000538136 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6□□□□□ -1.45
MSH6-209ENST00000538136 IGF2P01344 180 aa6□□□□□ -1.45
MSH6-209ENST00000538136 HLA-AP01891 365 aaKnown RBP6□□□□□ -1.45
MSH6-209ENST00000538136 ALDOBP05062 364 aa6□□□□□ -1.45
MSH6-209ENST00000538136 GZMHP20718 246 aa6□□□□□ -1.45
MSH6-209ENST00000538136 ETV6P41212 452 aa6□□□□□ -1.45
MSH6-209ENST00000538136 DVL1P1P54792 670 aaPredicted RBP6□□□□□ -1.45
MSH6-209ENST00000538136 HACD4Q5VWC8 232 aa6□□□□□ -1.45
MSH6-209ENST00000538136 SSX8Q7RTT4 187 aa6□□□□□ -1.45
MSH6-209ENST00000538136 DRAM1Q8N682 238 aa6□□□□□ -1.45
MSH6-209ENST00000538136 OR4A16Q8NH70 328 aa6□□□□□ -1.45
MSH6-209ENST00000538136 SLC25A46Q96AG3 418 aa6□□□□□ -1.45
MSH6-209ENST00000538136 RANBP3Q9H6Z4 567 aaPredicted RBP6□□□□□ -1.45
MSH6-209ENST00000538136 CTSZQ9UBR2 303 aa6□□□□□ -1.45
MSH6-209ENST00000538136 KCNK7Q9Y2U2 307 aa6□□□□□ -1.45
MSH6-209ENST00000538136 POMT1Q9Y6A1 747 aa6□□□□□ -1.45
MSH6-209ENST00000538136 TANC2Q9HCD6 1990 aa6□□□□□ -1.45
MSH6-209ENST00000538136 FXYD6-FXYD2A0A087WZ82 144 aa6□□□□□ -1.45
MSH6-209ENST00000538136 BPNT1O95861 308 aa6□□□□□ -1.45
MSH6-209ENST00000538136 DHFRP00374 187 aa6□□□□□ -1.45
MSH6-209ENST00000538136 CEACAM3P40198 252 aa6□□□□□ -1.45
MSH6-209ENST00000538136 ZNF133P52736 654 aaPredicted RBP6□□□□□ -1.45
MSH6-209ENST00000538136 PIGPP57054 158 aa6□□□□□ -1.45
MSH6-209ENST00000538136 RPS27AP62979 156 aaKnown RBP6□□□□□ -1.45
MSH6-209ENST00000538136 OVCH2Q7RTZ1 564 aa6□□□□□ -1.45
MSH6-209ENST00000538136 ANKRD13BQ86YJ7 626 aa6□□□□□ -1.45
MSH6-209ENST00000538136 NUP37Q8NFH4 326 aa6□□□□□ -1.45
MSH6-209ENST00000538136 R3HDM4Q96D70 268 aa6□□□□□ -1.45
MSH6-209ENST00000538136 FXYD6Q9H0Q3 95 aa6□□□□□ -1.45
MSH6-209ENST00000538136 IGLV3-9A0A075B6K5 115 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 WIPF3A6NGB9 483 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 SRRM5B3KS81 715 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 PGA5P0DJD9 388 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 AADACP22760 399 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 HOXA1P49639 335 aaPredicted RBP5.99□□□□□ -1.45
MSH6-209ENST00000538136 CATR1Q13166 79 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 UBE2NLQ5JXB2 153 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 FAM120AOSQ5T036 256 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 DHRS7BQ6IAN0 325 aaPredicted RBP5.99□□□□□ -1.45
MSH6-209ENST00000538136 PYHIN1Q6K0P9 492 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 TMEM65Q6PI78 240 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 COLCA1Q6ZS62 124 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 OR4D10Q8NGI6 311 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 C17orf50Q8WW18 174 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 WDFY2Q96P53 400 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 SEC22CQ9BRL7 303 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 RYDENQ9NUL5 291 aaKnown RBP5.99□□□□□ -1.45
MSH6-209ENST00000538136 FOXJ3Q9UPW0 622 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 DHRS7CA6NNS2 312 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 K7N7A8 449 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 CST4P01036 141 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 IFNA2P01563 188 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 IGHV4-59P01825 116 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 PRH1P02810 166 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 KITLGP21583 273 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 RRAS2P62070 204 aaPredicted RBP5.99□□□□□ -1.45
MSH6-209ENST00000538136 RPS11P62280 158 aaKnown RBP eCLIP5.99□□□□□ -1.45
MSH6-209ENST00000538136 UNC119Q13432 240 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 DIAPH2-AS1Q14236 149 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 MBNL2Q5VZF2 373 aaKnown RBP5.99□□□□□ -1.45
MSH6-209ENST00000538136 CENPSQ8N2Z9 138 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 LRRC20Q8TCA0 184 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 EDARADDQ8WWZ3 215 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 MISP3Q96FF7 219 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 CLEC7AQ9BXN2 247 aa5.99□□□□□ -1.45
MSH6-209ENST00000538136 HOXA3O43365 443 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms