RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 UBE2KP61086 200 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 TESK1Q15569 626 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 IL17BQ9UHF5 180 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 KLF13Q9Y2Y9 288 aaPredicted RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 RBM7Q9Y580 266 aaKnown RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 OR2H2O95918 312 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 WNT2P09544 360 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 B2MP61769 119 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 SLC10A1Q14973 349 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 FBXW9Q5XUX1 488 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 HEPN1Q6WQI6 88 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 WDR86Q86TI4 376 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 TRAPPC2LQ9UL33 140 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 SYNGR2O43760 224 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 ZNF16P17020 682 aaPredicted RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 DLK1P80370 383 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 RSG1Q9BU20 258 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 RTL8AQ9BWD3 113 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 BCL2L14Q9BZR8 327 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 DEFB127Q9H1M4 99 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 KCNS2Q9ULS6 477 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 KLRC4-KLRK1H3BQV0 150 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 IFNA17P01571 189 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 IGKV1-5P01602 117 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
USP44-203ENST00000537435 PSENENQ9NZ42 101 aa12.13□□□□□ -0.47
USP44-203ENST00000537435 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 AP4M1O00189 453 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 METTL15P1P0C7V9 234 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 ARL16Q0P5N6 197 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 ZNF497Q6ZNH5 498 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 C1QL4Q86Z23 238 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 SCCPDHQ8NBX0 429 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 MMP24Q9Y5R2 645 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 IGHV3-64DA0A0J9YX35 117 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
USP44-203ENST00000537435 WDR1O75083 606 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 CELA3BP08861 270 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
USP44-203ENST00000537435 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 TVP23CQ96ET8 276 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
USP44-203ENST00000537435 A0A087WWC5 75 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 LOC102723971A0A1B0GUV8 181 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 ZNF343Q6P1L6 599 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 LIN7CQ9NUP9 197 aaKnown RBP12.11□□□□□ -0.47
USP44-203ENST00000537435 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 FAM186AA6NE01 2351 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 CDIPTO14735 213 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 SMPD2O60906 423 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 Q8IYB0 196 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 SPRR3Q9UBC9 169 aa12.11□□□□□ -0.47
USP44-203ENST00000537435 NXPH2O95156 264 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 CEACAM6P40199 344 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 HAPLN4Q86UW8 402 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 TCTEX1D2Q8WW35 142 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 OR14J1Q9UGF5 321 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 URGCP-MRPS24S4R325 110 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 CLN5O75503 358 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 PPP1CBP62140 327 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 ELOBQ15370 118 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 NCMAPQ5T1S8 102 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 DRAM1Q8N682 238 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms