RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CCL3L1P16619 93 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 PAICSP22234 425 aaKnown RBP3.87□□□□□ -1.79
CLIP1-207ENST00000536634 CAV3P56539 151 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RAB25P57735 213 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 TAS2R41P59536 307 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RAP1BP61224 184 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RPL23AP62750 156 aaKnown RBP3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RAP1AP62834 184 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 SCN1BQ07699 218 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 MRPL28Q13084 256 aaKnown RBP3.87□□□□□ -1.79
CLIP1-207ENST00000536634 SELPLGQ14242 412 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 Q1RN00 199 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 DEFB136Q30KP8 78 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 GLYATL3Q5SZD4 288 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 ATAD3CQ5T2N8 411 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 PET117Q6UWS5 81 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 FAM122BQ7Z309 247 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 DPY19L4Q7Z388 723 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 OR2W3Q7Z3T1 314 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 FUNDC1Q8IVP5 155 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 NHLRC2Q8NBF2 726 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 OR1M1Q8NGA1 313 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 OR51D1Q8NGF3 324 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 OR52H1Q8NGJ2 320 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 ANGPTL6Q8NI99 470 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 DYDC1Q8WWB3 177 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 OR52B2Q96RD2 323 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 FGF23Q9GZV9 251 aaPredicted RBP3.87□□□□□ -1.79
CLIP1-207ENST00000536634 SP140LQ9H930 580 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RNPEPL1Q9HAU8 725 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 S100A14Q9HCY8 104 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 ABCB10Q9NRK6 738 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RIMS3Q9UJD0 308 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 PITPNC1Q9UKF7 332 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 POLR1DQ9Y2S0 133 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 MED31Q9Y3C7 131 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 FAM32AQ9Y421 112 aaKnown RBP3.87□□□□□ -1.79
CLIP1-207ENST00000536634 MUC4Q99102 2169 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 IGKV1D-17A0A075B6S4 117 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 GGT3PA6NGU5 568 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 CDC42EP2O14613 210 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 CDIPTO14735 213 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF253O75346 499 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 OR5F1O95221 314 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ARG1P05089 322 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 CD14P08571 375 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 PSKH1P11801 424 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 GPX2P18283 190 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 CD24P25063 80 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 GGT2P36268 569 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 MYCNOSP40205 109 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ID1P41134 155 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 DYNLT3P51808 116 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 BNIP1Q12981 228 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 KRR1Q13601 381 aaKnown RBP3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ABCA11PQ4W5N1 156 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 TSEN54Q7Z6J9 526 aaKnown RBP3.86□□□□□ -1.79
CLIP1-207ENST00000536634 AQP12AQ8IXF9 295 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 IFT20Q8IY31 132 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 TMEM185AQ8NFB2 350 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 OR4M1Q8NGD0 313 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 OR5K1Q8NHB7 308 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 RPL3LQ92901 407 aaKnown RBP3.86□□□□□ -1.79
CLIP1-207ENST00000536634 FAM162AQ96A26 154 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ISOC1Q96CN7 298 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 PITX2Q99697 317 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 TM2D3Q9BRN9 247 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 DNTTIP1Q9H147 329 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 TLNRD1Q9H1K6 362 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 RHBDL2Q9NX52 303 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF319Q9P2F9 582 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 LGALS13Q9UHV8 139 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF222Q9UK12 451 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
CLIP1-207ENST00000536634 NOP16Q9Y3C1 178 aaKnown RBP3.86□□□□□ -1.79
CLIP1-207ENST00000536634 FBXO7Q9Y3I1 522 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 HILPDAQ9Y5L2 63 aa3.86□□□□□ -1.79
CLIP1-207ENST00000536634 IGLV1-36A0A0B4J1U3 117 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 PSMB11A5LHX3 300 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 SEC14L6B5MCN3 397 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 M0R135 149 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 XKRYO14609 159 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 UBDO15205 165 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 AKR7A2O43488 359 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 GLCEO94923 617 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 LYNP07948 512 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 SLC2A1P11166 492 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 PSG2P11465 335 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 PRKACBP22694 351 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 PPIBP23284 216 aaKnown RBP3.85□□□□□ -1.79
CLIP1-207ENST00000536634 MDH1P40925 334 aaKnown RBP3.85□□□□□ -1.79
CLIP1-207ENST00000536634 RPS27P42677 84 aaKnown RBP3.85□□□□□ -1.79
CLIP1-207ENST00000536634 GPR4P46093 362 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 GABRA2P47869 451 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 OR1E2P47887 323 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 FHITP49789 147 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 SLC25A1P53007 311 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 DLX6P56179 175 aa3.85□□□□□ -1.79
CLIP1-207ENST00000536634 MTPNP58546 118 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms