RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 RANBP3Q9H6Z4 567 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-219ENST00000534753 LSM2Q9Y333 95 aaKnown RBP7.16□□□□□ -1.26
CCDC90B-219ENST00000534753 AMMECR1Q9Y4X0 333 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-219ENST00000534753 SPINT2O43291 252 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 MT-ND4P03905 459 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CSF1P09603 554 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CGB3P0DN86 165 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CGB7P0DN87 165 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CD28P10747 220 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 GZMHP20718 246 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 FUT3P21217 361 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CRHBPP24387 322 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CD34P28906 385 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 DYNLT3P51808 116 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 MADCAM1Q13477 382 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 DIAPH2-AS1Q14236 149 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 IRF3Q14653 427 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 C2orf68Q2NKX9 166 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 ABCA11PQ4W5N1 156 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 FBLN7Q53RD9 439 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 RNLSQ5VYX0 342 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 UNQ9370/PRO34162Q6UXP9 181 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 C5orf24Q7Z6I8 188 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 MOB3BQ86TA1 216 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 LRRTM1Q86UE6 522 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CDH26Q8IXH8 852 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 DRAM1Q8N682 238 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 OR56B4Q8NH76 319 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 SETD6Q8TBK2 473 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 AKR1E2Q96JD6 320 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 SPATA25Q9BR10 227 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 UQCC2Q9BRT2 126 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 CST11Q9H112 138 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 DUSP21Q9H596 190 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 PLGRKTQ9HBL7 147 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 SPACA1Q9HBV2 294 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 GNG12Q9UBI6 72 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 AK6Q9Y3D8 172 aaKnown RBP7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 PKD1L1Q8TDX9 2849 aa7.15□□□□□ -1.26
CCDC90B-219ENST00000534753 A0A087X0M5 115 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 IGHV3-72A0A0B4J1Y9 119 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 A0A1B0GX30 115 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 NPIPB11E5RHQ5 1161 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 LY6LH3BQJ8 138 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 SNRNP70P08621 437 aaKnown RBP7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 FAM106CPP0CH98 169 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 RCC1P18754 421 aaPredicted RBP7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 HTR2CP28335 458 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 CCDC144NLQ6NUI1 221 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 C11orf88Q6PI97 169 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 PRSS48Q7RTY5 328 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 CENPVQ7Z7K6 275 aaPredicted RBP7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 MRPS24Q96EL2 167 aaKnown RBP7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 NEDD4LQ96PU5 975 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 MGLLQ99685 303 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 FAAP24Q9BTP7 215 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 TMEM59Q9BXS4 323 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 MMP27Q9H306 513 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 NCOR1P1Q9H4R4 102 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 CHMP1AQ9HD42 196 aaPredicted RBP7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 SERTAD4Q9NUC0 356 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 KCNIP1Q9NZI2 227 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 BLOC1S6Q9UL45 172 aa7.14□□□□□ -1.27
CCDC90B-219ENST00000534753 FAM90A22PA8MWA6 464 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 C12orf77C9JDV5 145 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 C15orf65H3BRN8 121 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 CCRL2O00421 344 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 HSD17B6O14756 317 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 ORC5O43913 435 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 PDCD6O75340 191 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 HBZP02008 142 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 UCHL1P09936 223 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 UBBP0CG47 229 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 TMEM11P17152 192 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 CALRP27797 417 aaKnown RBP7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 CLDN12P56749 244 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 FABP5Q01469 135 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 DEFA6Q01524 100 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 MLLT11Q13015 90 aaPredicted RBP7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 TPBGQ13641 420 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 RAB11BQ15907 218 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 KHDC1LQ5JSQ8 128 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 C6orf183Q5T699 404 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 SIGIRRQ6IA17 410 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 TMEM91Q6ZNR0 172 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 C6orf201Q7Z4U5 140 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 C1QL4Q86Z23 238 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 OR10A7Q8NGE5 316 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 KCNG3Q8TAE7 436 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 PHYHIPQ92561 330 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 RBMXL1Q96E39 390 aaKnown RBP7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 RBM14Q96PK6 669 aaKnown RBP7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 SULT4A1Q9BR01 284 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 NICN1Q9BSH3 213 aa7.13□□□□□ -1.27
CCDC90B-219ENST00000534753 TAF9BQ9HBM6 251 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms