RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 SLC25A48Q6ZT89 311 aaKnown RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 ZNF367Q7RTV3 350 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 C1QL4Q86Z23 238 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 PRR18Q8N4B5 295 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 SVOPQ8N4V2 548 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 C5orf56Q8N8D9 126 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR10A7Q8NGE5 316 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR52M1Q8NGK5 317 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR6M1Q8NGM8 313 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR4C13Q8NGP0 309 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 FAM110DQ8TAY7 271 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 NEK7Q8TDX7 302 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 CAPSLQ8WWF8 208 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 RTN4IP1Q8WWV3 396 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 CPNE2Q96FN4 548 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 C5orf30Q96GV9 206 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 ARHGAP5-AS1Q96IT6 56 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 EAF1Q96JC9 268 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 NOL4LQ96MY1 436 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 S100A13Q99584 98 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 CITED2Q99967 270 aaPredicted RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 ZNF251Q9BRH9 671 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 PECRQ9BY49 303 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR51E2Q9H255 320 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 TXNL4BQ9NX01 149 aaKnown RBP4.01□□□□□ -1.77
USH1C-210ENST00000534556 OR1A1Q9P1Q5 309 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 AK3Q9UIJ7 227 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 LINC00527Q9UJ94 153 aa4.01□□□□□ -1.77
USH1C-210ENST00000534556 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
USH1C-210ENST00000534556 TRAV1-2A0A0B4J238 106 aa4□□□□□ -1.77
USH1C-210ENST00000534556 TRDV1A0A1B0GX56 115 aa4□□□□□ -1.77
USH1C-210ENST00000534556 G3V4G9 280 aa4□□□□□ -1.77
USH1C-210ENST00000534556 RAB27BO00194 218 aa4□□□□□ -1.77
USH1C-210ENST00000534556 HSD17B6O14756 317 aa4□□□□□ -1.77
USH1C-210ENST00000534556 OR2F2O95006 317 aa4□□□□□ -1.77
USH1C-210ENST00000534556 IGKV1D-33P01593 117 aa4□□□□□ -1.77
USH1C-210ENST00000534556 IGKV1-33P01594 117 aa4□□□□□ -1.77
USH1C-210ENST00000534556 GLAP06280 429 aa4□□□□□ -1.77
USH1C-210ENST00000534556 SCTP09683 121 aa4□□□□□ -1.77
USH1C-210ENST00000534556 CD3GP09693 182 aa4□□□□□ -1.77
USH1C-210ENST00000534556 CD83Q01151 205 aa4□□□□□ -1.77
USH1C-210ENST00000534556 MADCAM1Q13477 382 aa4□□□□□ -1.77
USH1C-210ENST00000534556 RAB11BQ15907 218 aa4□□□□□ -1.77
USH1C-210ENST00000534556 NSUN5P1Q3KNT7 163 aa4□□□□□ -1.77
USH1C-210ENST00000534556 NKAPLQ5M9Q1 402 aa4□□□□□ -1.77
USH1C-210ENST00000534556 GLT8D1Q68CQ7 371 aa4□□□□□ -1.77
USH1C-210ENST00000534556 ZNF773Q6PK81 442 aa4□□□□□ -1.77
USH1C-210ENST00000534556 ETV3LQ6ZN32 361 aa4□□□□□ -1.77
USH1C-210ENST00000534556 LIAT1Q6ZQX7 453 aa4□□□□□ -1.77
USH1C-210ENST00000534556 SLC16A12Q6ZSM3 486 aa4□□□□□ -1.77
USH1C-210ENST00000534556 LCNL1Q6ZST4 164 aa4□□□□□ -1.77
USH1C-210ENST00000534556 ZNF329Q86UD4 541 aa4□□□□□ -1.77
USH1C-210ENST00000534556 THNSL2Q86YJ6 484 aa4□□□□□ -1.77
USH1C-210ENST00000534556 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
USH1C-210ENST00000534556 Q8N9W7 124 aa4□□□□□ -1.77
USH1C-210ENST00000534556 OR5H6Q8NGV6 325 aa4□□□□□ -1.77
USH1C-210ENST00000534556 OR2T6Q8NHC8 308 aa4□□□□□ -1.77
USH1C-210ENST00000534556 KCNG3Q8TAE7 436 aa4□□□□□ -1.77
USH1C-210ENST00000534556 MAFIPQ8WZ33 124 aa4□□□□□ -1.77
USH1C-210ENST00000534556 FAM3DQ96BQ1 224 aa4□□□□□ -1.77
USH1C-210ENST00000534556 NABP2Q9BQ15 211 aa4□□□□□ -1.77
USH1C-210ENST00000534556 HSPB9Q9BQS6 159 aa4□□□□□ -1.77
USH1C-210ENST00000534556 PRSS22Q9GZN4 317 aa4□□□□□ -1.77
USH1C-210ENST00000534556 NPFFR1Q9GZQ6 430 aa4□□□□□ -1.77
USH1C-210ENST00000534556 IFI27L2Q9H2X8 130 aa4□□□□□ -1.77
USH1C-210ENST00000534556 VCX3BQ9H321 246 aa4□□□□□ -1.77
USH1C-210ENST00000534556 LIN7BQ9HAP6 207 aa4□□□□□ -1.77
USH1C-210ENST00000534556 ABCB10Q9NRK6 738 aa4□□□□□ -1.77
USH1C-210ENST00000534556 GHRLQ9UBU3 117 aa4□□□□□ -1.77
USH1C-210ENST00000534556 TRAPPC2LQ9UL33 140 aa4□□□□□ -1.77
USH1C-210ENST00000534556 LRRC42Q9Y546 428 aa4□□□□□ -1.77
USH1C-210ENST00000534556 V9GY05 133 aa4□□□□□ -1.77
USH1C-210ENST00000534556 TENM3Q9P273 2699 aa4□□□□□ -1.77
USH1C-210ENST00000534556 RYR3Q15413 4870 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 TRBV6-6A0A0A6YYG2 114 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 TRIM64CA6NLI5 447 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 IFITM5A6NNB3 132 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OOSP1A8MZH6 123 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 CCRL2O00421 344 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 MFNGO00587 321 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 ST8SIA5O15466 376 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 LANCL1O43813 399 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 YPEL1O60688 119 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 GAPDHP04406 335 aaKnown RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 UBBP0CG47 229 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 ARSBP15848 533 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 GADD45AP24522 165 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 PSMB9P28065 219 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 FGF9P31371 208 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 VDAC2P45880 294 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 RAB7AP51149 207 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 HTD2P86397 168 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 DEFA6Q01524 100 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 LSAMPQ13449 338 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 TRAM1Q15629 374 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 RPL39P5Q59GN2 51 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 GLDNQ6ZMI3 551 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms