RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 DIO3P55073 304 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TPPP2P59282 170 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GNG3P63215 75 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TMEM267Q0VDI3 215 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ENDOGQ14249 297 aaKnown RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GNMTQ14749 295 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 KIR2DS5Q14953 304 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 PSG5Q15238 335 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ANKRD55Q3KP44 614 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ATP6AP1LQ52LC2 224 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 SLC25A53Q5H9E4 307 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TECRLQ5HYJ1 363 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 RTL6Q6ICC9 239 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 AGTRAPQ6RW13 159 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 C12orf54Q6X4T0 127 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 CPEB2Q7Z5Q1 589 aaKnown RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TMEM179BQ7Z7N9 219 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 SCD5Q86SK9 330 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TRPT1Q86TN4 253 aaKnown RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 UBALD2Q8IYN6 164 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 LRRC75AQ8NAA5 344 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 C5orf17Q8NAS9 161 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 SUMF2Q8NBJ7 301 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 OR10G4Q8NGN3 311 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 OR1N2Q8NGR9 330 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 OR13G1Q8NGZ3 307 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 OR2T27Q8NH04 317 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 MARCH1Q8TCQ1 289 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 Q8WTZ3 238 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GEMIN6Q8WXD5 167 aaKnown RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 PTX4Q96A99 478 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TVP23CQ96ET8 276 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ZFP3Q96NJ6 502 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 MS4A10Q96PG2 267 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GABRG3Q99928 467 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 PYGO2Q9BRQ0 406 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GFRA4Q9GZZ7 299 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ATG10Q9H0Y0 220 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 OR51I1Q9H343 314 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 MFSD1Q9H3U5 465 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 FGF20Q9NP95 211 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-219ENST00000534049 TMEM106BQ9NUM4 274 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 NECAP2Q9NVZ3 263 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 ZNF226Q9NYT6 803 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 PILRBQ9UKJ0 227 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 FUT9Q9Y231 359 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 YIPF1Q9Y548 306 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 WDFY4Q6ZS81 3184 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 GBF1Q92538 1859 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 MUC6Q6W4X9 2439 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 MYO15AQ9UKN7 3530 aa3.55□□□□□ -1.84
ITGB1-219ENST00000534049 DMDP11532 3685 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 SIP14410 1827 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 LOC100509620A0A075B734 347 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 TRAV14DV4A0A0A6YYC5 116 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 A0A1B0GU03 582 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 C13orf42A0A1B0GVH6 325 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 LRP5LA4QPB2 252 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 A6NDN8 102 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 M0QXV9 152 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 SIRPB1O00241 398 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 PIRO00625 290 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 RFXANKO14593 260 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 DEGS1O15121 323 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CD5LO43866 347 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 UPK3AO75631 287 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 LSM8O95777 96 aaKnown RBP3.54□□□□□ -1.84
ITGB1-219ENST00000534049 IGLV1-44P01699 117 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 GAPDHP04406 335 aaKnown RBP3.54□□□□□ -1.84
ITGB1-219ENST00000534049 ATP1B1P05026 303 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 REG1AP05451 166 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 HLA-DQB2P05538 268 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CTSDP07339 412 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CA3P07451 260 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 RAB40ALP0C0E4 278 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 IGLC1P0CG04 106 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 PRSS56P0CW18 603 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CHI3L1P36222 383 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-219ENST00000534049 PRLHRP49683 370 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 VAMP7P51809 220 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CCL23P55773 120 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 CLDN15P56746 228 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 H2BFSP57053 126 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 TAS2R31P59538 309 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 TAS2R20P59543 309 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 HIST1H1AQ02539 215 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-219ENST00000534049 ACVR1Q04771 509 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 PLCXD2Q0VAA5 305 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 FUT7Q11130 342 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 RAB40BQ12829 278 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 MMDQ15546 238 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 GABRA6Q16445 453 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 SLC25A52Q3SY17 297 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 LRRC73Q5JTD7 316 aa3.54□□□□□ -1.84
ITGB1-219ENST00000534049 RHBDD2Q6NTF9 364 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms