RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PRKACAP17612 351 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 BCL3P20749 454 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 CRHBPP24387 322 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 BDKRB2P30411 391 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF93P35789 620 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 CHRNA7P36544 502 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR3A1P47881 315 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 HILS1P60008 231 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZP1P60852 638 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 RPS11P62280 158 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 RPL31P62899 125 aaKnown RBP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 BDH1Q02338 343 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 PLA2G7Q13093 441 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF146Q15072 292 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPIN3Q5JUX0 258 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 RBM48Q5RL73 367 aaKnown RBP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ASPHD2Q6ICH7 369 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 BRD3OSQ6XYD6 125 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 USP43Q70EL4 1123 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 GDPD3Q7L5L3 318 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 VMO1Q7Z5L0 202 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 KIR3DL3Q8N743 410 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR51A2Q8NGJ7 313 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 TNFAIP8L1Q8WVP5 186 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 SSMEM1Q8WWF3 244 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 LHX4Q969G2 390 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR5M11Q96RB7 305 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 S100A13Q99584 98 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF184Q99676 751 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 GFI1Q99684 422 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 DUSP21Q9H596 190 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 RHOFQ9HBH0 211 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 HMG20AQ9NP66 347 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 GSN-AS1Q9NRJ2 163 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 C19orf12Q9NSK7 152 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 SERTAD4Q9NUC0 356 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 IL36RNQ9UBH0 155 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 GSTK1Q9Y2Q3 226 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ANK3Q12955 4377 aaKnown RBP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 JMJD1CQ15652 2540 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 TRBV5-7A0A0A0MS05 114 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGHV1-69DA0A0B4J2H0 117 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 CENPVL3A0A0U1RRI6 287 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 HSBP1L1C9JCN9 74 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 K7N7A8 449 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 M0R1W7 72 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SIRPB1O00241 398 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 GABRPO00591 440 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SH2D1BO14796 132 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 DEGS1O15121 323 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 MPPED1O15442 326 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPINT2O43291 252 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF737O75373 536 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 GPX5O75715 221 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 VENTXO95231 258 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPDEFO95238 335 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGHV1-69P01742 117 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 HSMCR30P0CW71 290 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGFBP3P17936 291 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 GABRR1P24046 479 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 CD1BP29016 333 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 TGFBR2P37173 567 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 PTGFRP43088 359 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR3A4PP47883 348 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 PPT1P50897 306 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 EDDM3BP56851 147 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 EDDM3AQ14507 147 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 RSU1Q15404 277 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 GRK1Q15835 563 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 MLANAQ16655 118 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 KRTAP24-1Q3LI83 254 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 ACSM3Q53FZ2 586 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 DDI2Q5TDH0 399 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 RUSC1-AS1Q66K80 236 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 CRIP3Q6Q6R5 217 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SIGLEC15Q6ZMC9 328 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 C9orf139Q6ZV77 190 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 PRSS48Q7RTY5 328 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 GPR141Q7Z602 305 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 PDZD9Q8IXQ8 264 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 MS4A15Q8N5U1 240 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SIGLECL1Q8N7X8 197 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 CHST4Q8NCG5 386 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 PXT1Q8NFP0 134 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR4M1Q8NGD0 313 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR5D13Q8NGL4 314 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 UFD1Q92890 307 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 DAZAP1Q96EP5 407 aaKnown RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 DERL3Q96Q80 235 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 TMED9Q9BVK6 235 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 CHST6Q9GZX3 395 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 METTL9Q9H1A3 318 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 METTL8Q9H825 291 aaKnown RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SEBOXQ9HB31 216 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 EXOSC4Q9NPD3 245 aaKnown RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 AKIP1Q9NQ31 210 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 SIRT7Q9NRC8 400 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 RDH8Q9NYR8 311 aa4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 ING4Q9UNL4 249 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms