RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 MINDY2Q8NBR6 621 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 OR1L1Q8NH94 360 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 RITA1Q96K30 269 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 OR5B12Q96R08 314 aa11.57□□□□□ -0.56
CAPN1-219ENST00000530495 RCC2Q9P258 522 aaKnown RBP11.57□□□□□ -0.56
CAPN1-219ENST00000530495 RPL36Q9Y3U8 105 aaKnown RBP11.57□□□□□ -0.56
CAPN1-219ENST00000530495 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 ATP6V0E1O15342 81 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 GPX5O75715 221 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 HLA-DRB1P01911 266 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 IGFBP3P17936 291 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-219ENST00000530495 MYF6P23409 242 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 ACTBP60709 375 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 MORN2Q502X0 79 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 TRAT1Q6PIZ9 186 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 OVCH2Q7RTZ1 564 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 PRR18Q8N4B5 295 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 OR4K15Q8NH41 348 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 DLX4Q92988 240 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-219ENST00000530495 MRPS24Q96EL2 167 aaKnown RBP11.56□□□□□ -0.56
CAPN1-219ENST00000530495 ZNF184Q99676 751 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-219ENST00000530495 FGF20Q9NP95 211 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-219ENST00000530495 ISYNA1Q9NPH2 558 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 ETAA1Q9NY74 926 aa11.56□□□□□ -0.56
CAPN1-219ENST00000530495 IGHV7-81A0A0B4J1V7 117 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 OGG1O15527 345 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 SC5DO75845 299 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 SPNP16150 400 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 RCC1P18754 421 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-219ENST00000530495 ADARB1P78563 741 aaKnown RBP11.55□□□□□ -0.56
CAPN1-219ENST00000530495 RIPK1Q13546 671 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 RAB12Q6IQ22 244 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 LIN54Q6MZP7 749 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 ORAI1Q96D31 301 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 ANKRD60Q9BZ19 345 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 OR2S2Q9NQN1 319 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 FAM53CQ9NYF3 392 aa11.55□□□□□ -0.56
CAPN1-219ENST00000530495 LCE6AA0A183 80 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 H3BNX3 289 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 NBR2O15453 112 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 SAP30O75446 220 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 CA11O75493 328 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 CIB2O75838 187 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 GP9P14770 177 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 CNTFRP26992 372 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 ETV1P50549 477 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 NPBQ8NG41 125 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 ZNF251Q9BRH9 671 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 ALX4Q9H161 411 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-219ENST00000530495 TAF9BQ9HBM6 251 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 PARP11Q9NR21 331 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 MBNL3Q9NUK0 354 aaKnown RBP11.54□□□□□ -0.56
CAPN1-219ENST00000530495 ERGIC3Q9Y282 383 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 PEX16Q9Y5Y5 336 aa11.54□□□□□ -0.56
CAPN1-219ENST00000530495 TRBV5-5A0A0J9YX44 114 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 LOC100130705A0A1B0GUX0 176 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 FAM90A7PA6NKC0 464 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 FAM90A23PA8MXZ1 464 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 LINC01619G3V211 115 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 GLAP06280 429 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-219ENST00000530495 CRIP2P52943 208 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-219ENST00000530495 C19orf54Q5BKX5 351 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 OR2G6Q5TZ20 316 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 TMPRSS11AQ6ZMR5 421 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 ZNF554Q86TJ5 538 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 SMIM19Q96E16 107 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 TOLLIPQ9H0E2 274 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 GHITMQ9H3K2 345 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 PALMDQ9NP74 551 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 BABAM2Q9NXR7 383 aa11.53□□□□□ -0.56
CAPN1-219ENST00000530495 MRPS28Q9Y2Q9 187 aaKnown RBP11.53□□□□□ -0.56
CAPN1-219ENST00000530495 SOX15O60248 233 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 YPEL1O60688 119 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 NDUFA3O95167 84 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 FUT3P21217 361 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 DCKP27707 260 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 SLURP1P55000 103 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 HTD2P86397 168 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 GABPB1Q06547 395 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-219ENST00000530495 GNMTQ14749 295 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 LY6G6FQ5SQ64 297 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 ZNF660Q6AZW8 331 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-219ENST00000530495 GLIPR1L1Q6UWM5 242 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 ZNF833PQ6ZTB9 187 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms