RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 UBE2CO00762 179 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SH2D1BO14796 132 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 CCDC22O60826 627 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 GATBO75879 557 aaKnown RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 FAM107AO95990 144 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 CYB5AP00167 134 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 IL1AP01583 271 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV3-11P01762 117 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV3-43DP0DP04 118 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 HSD17B1P14061 328 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 RBP2P50120 134 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 F2RL1P55085 397 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 MTCP1P56278 107 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ISL1P61371 349 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 KIAA0141Q14154 515 aaPredicted RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SPIN3Q5JUX0 258 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SLC35D3Q5M8T2 416 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 OR2T5Q6IEZ7 315 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 Q6P435 159 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 TMEM65Q6PI78 240 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 CROCCP3Q8IVE0 287 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SGPP2Q8IWX5 399 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SLC35F2Q8IXU6 374 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 Q8IYB0 196 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SLC38A6Q8IZM9 456 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 LINC00518Q8N0U6 118 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 Q8N1Y9 231 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 Q8N6K4 173 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 YIPF7Q8N8F6 280 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF491Q8N8L2 437 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SETD9Q8NE22 299 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 OR6Q1Q8NGQ2 317 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 OR2T10Q8NGZ9 312 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 OR2T29Q8NH02 315 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 GIPC3Q8TF64 312 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ASB17Q8WXJ9 295 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 LINC00476Q8WZB0 136 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 DDB2Q92466 427 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ADAT3Q96EY9 351 aaPredicted RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 CNN2Q99439 309 aaKnown RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 S1PR3Q99500 378 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 TMED9Q9BVK6 235 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 GON7Q9BXV9 100 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 CHST5Q9GZS9 411 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 TREM1Q9NP99 234 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 PARP11Q9NR21 331 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 PLSCR3Q9NRY6 295 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 C19orf73Q9NVV2 129 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 TVP23BQ9NYZ1 205 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF581Q9P0T4 197 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF107Q9UII5 783 aaPredicted RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 VSIG4Q9Y279 399 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 A3GALT2U3KPV4 340 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 HSPG2P98160 4391 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PKD1P98161 4303 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 TCRBV5S2A0A599 114 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 LINC01619G3V211 115 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 H0YJX3 145 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 DEGS1O15121 323 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 ATP6V0E1O15342 81 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 SLC31A2O15432 143 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 DENRO43583 198 aaKnown RBP2.71□□□□□ -1.98
PTPRC-213ENST00000529828 MPZL2O60487 215 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 BRI3O95415 125 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 CSTBP04080 98 aaKnown RBP2.71□□□□□ -1.98
PTPRC-213ENST00000529828 IFNA6P05013 189 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 OCM2P0CE71 109 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 OCMP0CE72 109 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-213ENST00000529828 CCL1P22362 96 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PRKACGP22612 351 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 CNTFRP26992 372 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 ATP1B3P54709 279 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 ZP1P60852 638 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 CDC42P60953 191 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PITPNAQ00169 270 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PDZK1IP1Q13113 114 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PMS2P11Q13670 270 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 ECSCRQ19T08 205 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PAN3Q58A45 887 aaKnown RBP2.71□□□□□ -1.98
PTPRC-213ENST00000529828 LPCAT4Q643R3 524 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 ACSM6Q6P461 480 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 IZUMO1Q8IYV9 350 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 RPP25LQ8N5L8 163 aaKnown RBP2.71□□□□□ -1.98
PTPRC-213ENST00000529828 OR10AC1Q8NH08 325 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 PLPPR1Q8TBJ4 325 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 HAVCR2Q8TDQ0 301 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 CMTM5Q96DZ9 223 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 OR6C3Q9NZP0 311 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 TMEM14AQ9Y6G1 99 aa2.71□□□□□ -1.98
PTPRC-213ENST00000529828 SERTM2A0A1B0GWG4 89 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 DHRS7CA6NNS2 312 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 C12orf77C9JDV5 145 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 E9PI62 339 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF670-ZNF695F2Z2N8 137 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 SLC22A1O15245 554 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 PRKYO43930 277 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 MOSP00540 346 aa2.7□□□□□ -1.98
PTPRC-213ENST00000529828 SERPINA3P01011 423 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms