RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 GOLGA4Q13439 2230 aaKnown RBP7.38□□□□□ -1.23
CTNND1-219ENST00000528621 M0R143 59 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 CLDN18P56856 261 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 PAFAH1B2P68402 229 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 PSG4Q00888 419 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 ECSCRQ19T08 205 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 SIGIRRQ6IA17 410 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 SSMEM1Q8WWF3 244 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 KCNK17Q96T54 332 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 GHITMQ9H3K2 345 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 IGKV1-8A0A0C4DH67 115 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 SMPD2O60906 423 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 UPK3AO75631 287 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 MGPP08493 103 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 NPY1RP25929 384 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 EFNB2P52799 333 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 SERF2P84101 59 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 TMEM255AQ5JRV8 349 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 STPG1Q5TH74 334 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 FAM214BQ7L5A3 538 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 H1FOOQ8IZA3 346 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-219ENST00000528621 ADAMTS17Q8TE56 1095 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 SNX22Q96L94 193 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 LINC00052Q96N35 136 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 CLN8Q9UBY8 286 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 CROCCQ5TZA2 2017 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 CENPVL1A0A0U1RR11 272 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 HELTA6NFD8 242 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 CAMPP49913 170 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 ELOBQ15370 118 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 C10orf111Q8N326 155 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 GBGT1Q8N5D6 347 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 TMEM171Q8WVE6 324 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 LRRC3BQ96PB8 259 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 PILRBQ9UKJ0 227 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 PARP14Q460N5 1801 aa7.38□□□□□ -1.23
CTNND1-219ENST00000528621 J3QW42 95 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 APCSP02743 223 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 FTH1P19P0C7X4 201 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 COMPP49747 757 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 IGLV3-21P80748 117 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 LRP11Q86VZ4 500 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 RAB24Q969Q5 203 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 COL11A1P12107 1806 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 MFSD2BA6NFX1 497 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 GAPDHP04406 335 aaKnown RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 SMIM10L1P0DMW3 83 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 OR1K1Q8NGR3 316 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 ADIPOR1Q96A54 375 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 SMIM10Q96HG1 83 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 ZNF552Q9H707 407 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 M0QZK8 103 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 SIAH2O43255 324 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 GREM1O60565 184 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 CRISP2P16562 243 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 HOXA6P31267 233 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 HDHD3Q9BSH5 251 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 MSL2Q9HCI7 577 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 MICAL3Q7RTP6 2002 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 PLA2G10O15496 165 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 GPR6P46095 362 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 FAM181AQ8N9Y4 354 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 GPA33Q99795 319 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 TRBV5-7A0A0A0MS05 114 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 TRBV23-1A0A0A0MS06 115 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 A0A0J9YW62 118 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 FAM90A26D6RGX4 464 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 J3QR06 171 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 PTBP3O95758 552 aaKnown RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 NAT1P18440 290 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 PPP1CCP36873 323 aaKnown RBP7.37□□□□□ -1.23
CTNND1-219ENST00000528621 B2MP61769 119 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 ZNF79Q15937 498 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 AQP3Q92482 292 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 LPAR5Q9H1C0 372 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 HSF4Q9ULV5 492 aa7.37□□□□□ -1.23
CTNND1-219ENST00000528621 C7orf66A4D0T2 115 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 J3KRW8 73 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 PAGE4O60829 102 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 CELA2AP08217 269 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 FAM157CP0CG43 387 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 VWA1Q6PCB0 445 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 RFLNBQ8N5W9 214 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 ZNF488Q96MN9 340 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 P2RX4Q99571 388 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 BET1LQ9NYM9 111 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 ELOVL5Q9NYP7 299 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 CDC42EP3Q9UKI2 254 aa7.36□□□□□ -1.23
CTNND1-219ENST00000528621 SF3B6Q9Y3B4 125 aaKnown RBP7.36□□□□□ -1.23
CTNND1-219ENST00000528621 NPIPB13A6NJU9 1138 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms