RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 M0QZ24 198 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 UBE2NP61088 152 aaKnown RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 Q6ZSR6 202 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 LYG1Q8N1E2 194 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 RPP25LQ8N5L8 163 aaKnown RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 SSC4DQ8WTU2 575 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 ABHD14BQ96IU4 210 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 A0A1W2PQD3 144 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 C11orf94C9JXX5 98 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 PDCD6O75340 191 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 TMEM11P17152 192 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 ARL16Q0P5N6 197 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 NMSQ5H8A3 153 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 ZNF525Q8N782 197 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 TAAR3PQ9P1P4 343 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 IGHV3-20A0A0C4DH32 117 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 KIAA1324LA8MWY0 1029 aaPredicted RBP10.72□□□□□ -0.69
TSKU-203ENST00000527881 SYNGR2O43760 224 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 CLDN1O95832 211 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 TYMSP04818 313 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 C1QTNF9P0C862 333 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 DEFA4P12838 97 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 AMTP48728 403 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 UBE2V1Q13404 147 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 GJC3Q8NFK1 279 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 TNFP01375 233 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 NPBWR2P48146 333 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 SOX8P57073 446 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 CNN3Q15417 329 aaKnown RBP10.72□□□□□ -0.69
TSKU-203ENST00000527881 CRIP3Q6Q6R5 217 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
TSKU-203ENST00000527881 IGKV1D-13A0A0B4J2D9 117 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 A0A0G2JRQ6 117 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 FCN1O00602 326 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 SCTP09683 121 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 IGKV1-13P0DP09 117 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 THBS3P49746 956 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 SLC38A11Q08AI6 406 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 SHBQ15464 509 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 DTX1Q86Y01 620 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 ORAOV1Q8WV07 137 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 TAF15Q92804 592 aaKnown RBP eCLIP10.71□□□□□ -0.69
TSKU-203ENST00000527881 PSMG3Q9BT73 122 aaPredicted RBP10.71□□□□□ -0.69
TSKU-203ENST00000527881 WNT10AQ9GZT5 417 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 BET1LQ9NYM9 111 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 NDUFB8O95169 186 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 ARL4DP49703 201 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 FOXL2P58012 376 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 IL1F10Q8WWZ1 152 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 PIGCQ92535 297 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 FAM131CQ96AQ9 280 aa10.71□□□□□ -0.69
TSKU-203ENST00000527881 MRPL13Q9BYD1 178 aaKnown RBP10.71□□□□□ -0.69
TSKU-203ENST00000527881 PNRC2Q9NPJ4 139 aaKnown RBP10.71□□□□□ -0.69
TSKU-203ENST00000527881 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.69
TSKU-203ENST00000527881 F6UZH7 168 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 SPINK4O60575 86 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 NDUFB4O95168 129 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.7
TSKU-203ENST00000527881 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 MAJINQ3KP22 176 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 ST8SIA1Q92185 356 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 SPTSSAQ969W0 71 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 FAM122AQ96E09 287 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 SGCZQ96LD1 299 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 DEFB118Q96PH6 123 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 RNF115Q9Y4L5 304 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 ESPL1Q14674 2120 aa10.71□□□□□ -0.7
TSKU-203ENST00000527881 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 NCOA6Q14686 2063 aaPredicted RBP10.7□□□□□ -0.7
TSKU-203ENST00000527881 HNRNPA1P09651 372 aaKnown RBP eCLIP10.7□□□□□ -0.7
TSKU-203ENST00000527881 NTF3P20783 257 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 LRRC75BQ2VPJ9 315 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 SPSB1Q96BD6 273 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 WDR61Q9GZS3 305 aaKnown RBP10.7□□□□□ -0.7
TSKU-203ENST00000527881 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
TSKU-203ENST00000527881 CBR3O75828 277 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 PSG2P11465 335 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 HOXB2P14652 356 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 MSR1P21757 451 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 UCP1P25874 307 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 C17orf67Q0P5P2 114 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 PLCXD3Q63HM9 321 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 RNF2Q99496 336 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 KIR2DS5A0A0G2JLQ3 304 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 A0A0G2JNG1 304 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 CLEC18AA5D8T8 446 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 KIR2DS3K7RE56 304 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 NRASP01111 189 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 KRASP01116 189 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 IER3P46695 156 aa10.7□□□□□ -0.7
TSKU-203ENST00000527881 TFF2Q03403 129 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms