RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PGA3P0DJD8 388 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 KIR3DL2P43630 455 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CSNK1A1P48729 337 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 PRPS1P60891 318 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SPCS3P61009 180 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 LCN6P62502 163 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 FMODQ06828 376 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C1DQ13901 141 aaKnown RBP2.63□□□□□ -1.99
CD44-219ENST00000525685 GABRA6Q16445 453 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CEACAM16Q2WEN9 425 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TP53I3Q53FA7 332 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 HIKESHIQ53FT3 197 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 YIF1BQ5BJH7 314 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 MESTQ5EB52 335 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TEX30Q5JUR7 227 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C6orf183Q5T699 404 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C1orf146Q5VVC0 180 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR2T5Q6IEZ7 315 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SLC35D2Q76EJ3 337 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 BIVMQ86UB2 503 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SLC35F2Q8IXU6 374 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C20orf196Q8IYI0 205 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SVOPLQ8N434 492 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C17orf78Q8N4C9 275 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 FTMTQ8N4E7 242 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 ZNF433Q8N7K0 673 aaPredicted RBP2.63□□□□□ -1.99
CD44-219ENST00000525685 SYT14Q8NB59 555 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 NOXO1Q8NFA2 376 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 STEAP2Q8NFT2 490 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR10G2Q8NGC3 310 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR2T29Q8NH02 315 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR51A7Q8NH64 312 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR56B4Q8NH76 319 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR6X1Q8NH79 312 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 AKR7LQ8NHP1 331 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CANT1Q8WVQ1 401 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 NRGNQ92686 78 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TMEM54Q969K7 222 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 PIK3IP1Q96FE7 263 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TMEM101Q96IK0 257 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SEC22AQ96IW7 307 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 GPX7Q96SL4 187 aaPredicted RBP2.63□□□□□ -1.99
CD44-219ENST00000525685 MED18Q9BUE0 208 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CHID1Q9BWS9 393 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 ULBP2Q9BZM5 246 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 FAM192AQ9GZU8 254 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 REEP1Q9H902 201 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SLC25A22Q9H936 323 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 MCCC2Q9HCC0 563 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 C19orf12Q9NSK7 152 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 FAIMQ9NVQ4 179 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 ZNF226Q9NYT6 803 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CYB5R1Q9UHQ9 305 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 SIGLEC7Q9Y286 467 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 LRRC42Q9Y546 428 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 PUS1Q9Y606 427 aaKnown RBP eCLIP2.63□□□□□ -1.99
CD44-219ENST00000525685 SLC25A15Q9Y619 301 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CDH10Q9Y6N8 788 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 V9GY05 133 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 MYO7BQ6PIF6 2116 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 CACNA1CQ13936 2221 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 SPTA1P02549 2419 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 INTS1Q8N201 2190 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 A0A1B0GUS0 222 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 CIB4A0PJX0 185 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ARRDC5A6NEK1 342 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 DPRXA6NFQ7 191 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 OR5H1A6NKK0 313 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ZNF99A8MXY4 864 aaPredicted RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 NOS1APO75052 506 aaPredicted RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 CLPXO76031 633 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 NDUFB2O95178 105 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 RAB3DO95716 219 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 DHFRP00374 187 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 CST1P01037 141 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 KRT8P05787 483 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 CD14P08571 375 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 NR2C1P13056 603 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 HTR1FP30939 366 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 IFNGR2P38484 337 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 GSSP48637 474 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 SMIM11AP58511 58 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ACTR3P61158 418 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ERVK-25P63136 954 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 BSPH1Q075Z2 132 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 TSPAN31Q12999 210 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 KRR1Q13601 381 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 GK3PQ14409 553 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ATP6AP1Q15904 470 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 RFX4Q33E94 735 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ZBED5Q49AG3 693 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 BEX5Q5H9J7 111 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 TIMM23BQ5SRD1 257 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 NCMAPQ5T1S8 102 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 C10orf128Q5T292 105 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 HES5Q5TA89 166 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 C1orf94Q6P1W5 598 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ZNF620Q6ZNG0 422 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 GDPD3Q7L5L3 318 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms