RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZNF429Q86V71 674 aa18.59■□□□□ 0.57
USP47-205ENST00000525257 ZNF184Q99676 751 aaPredicted RBP18.59■□□□□ 0.57
USP47-205ENST00000525257 ETAA1Q9NY74 926 aa18.59■□□□□ 0.57
USP47-205ENST00000525257 RCC2Q9P258 522 aaKnown RBP18.59■□□□□ 0.57
USP47-205ENST00000525257 LYSTQ99698 3801 aa18.58■□□□□ 0.57
USP47-205ENST00000525257 MCRIP1C9JLW8 97 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 OVOL1O14753 267 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 LANCL1O43813 399 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 SAP30O75446 220 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 IGLV1-40P01703 118 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 CNTFRP26992 372 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 ACTBP60709 375 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 RIPK1Q13546 671 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 TMEM30BQ3MIR4 351 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 OR13C5Q8NGS8 318 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 RITA1Q96K30 269 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 OR51J1Q9H342 316 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 SPACA1Q9HBV2 294 aa18.58■□□□□ 0.56
USP47-205ENST00000525257 RPL36Q9Y3U8 105 aaKnown RBP18.58■□□□□ 0.56
USP47-205ENST00000525257 TRAV41A0A0B4J266 112 aa18.57■□□□□ 0.56
USP47-205ENST00000525257 MAGEA13PA6NCF6 341 aa18.57■□□□□ 0.56
USP47-205ENST00000525257 ATP5HO75947 161 aa18.57■□□□□ 0.56
USP47-205ENST00000525257 RCC1P18754 421 aaPredicted RBP18.57■□□□□ 0.56
USP47-205ENST00000525257 ADARB1P78563 741 aaKnown RBP18.57■□□□□ 0.56
USP47-205ENST00000525257 CCDC58Q4VC31 144 aa18.57■□□□□ 0.56
USP47-205ENST00000525257 RAB12Q6IQ22 244 aa18.57■□□□□ 0.56
USP47-205ENST00000525257 ALX4Q9H161 411 aaPredicted RBP18.57■□□□□ 0.56
USP47-205ENST00000525257 MRPS18AQ9NVS2 196 aaKnown RBP18.57■□□□□ 0.56
USP47-205ENST00000525257 GAR1Q9NY12 217 aaKnown RBP18.57■□□□□ 0.56
USP47-205ENST00000525257 EPPK1P58107 5090 aaKnown RBP18.56■□□□□ 0.56
USP47-205ENST00000525257 IGHV7-81A0A0B4J1V7 117 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 H3BNX3 289 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 HLA-DRB1P01911 266 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 FRMD6-AS1P0C7T7 363 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 SPNP16150 400 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 BLVRBP30043 206 aaPredicted RBP18.56■□□□□ 0.56
USP47-205ENST00000525257 RAB9AP51151 201 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 GABPB1Q06547 395 aaPredicted RBP18.56■□□□□ 0.56
USP47-205ENST00000525257 GNMTQ14749 295 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 OR2G6Q5TZ20 316 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 ZNF251Q9BRH9 671 aa18.56■□□□□ 0.56
USP47-205ENST00000525257 MRPL20Q9BYC9 149 aaKnown RBP18.56■□□□□ 0.56
USP47-205ENST00000525257 DNAH1Q9P2D7 4330 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 LYL1P12980 280 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 IGFBP3P17936 291 aaPredicted RBP18.55■□□□□ 0.56
USP47-205ENST00000525257 ETV1P50549 477 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 SLURP1P55000 103 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 GPR176Q14439 515 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 STEAP3Q658P3 488 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 TRAT1Q6PIZ9 186 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 APH1BQ8WW43 257 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 DLX4Q92988 240 aaPredicted RBP18.55■□□□□ 0.56
USP47-205ENST00000525257 MUL1Q969V5 352 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 CYYR1Q96J86 154 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 ABHD14AQ9BUJ0 271 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 ANKRD60Q9BZ19 345 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 TAF9BQ9HBM6 251 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 PALMDQ9NP74 551 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 OR2S2Q9NQN1 319 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 PEX16Q9Y5Y5 336 aa18.55■□□□□ 0.56
USP47-205ENST00000525257 FAM90A10PA6NDY2 464 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 NBR2O15453 112 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 MORN2Q502X0 79 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 C5orf24Q7Z6I8 188 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 GAPTQ8N292 157 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 OR52L2PQ8NGH6 319 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 SMIM19Q96E16 107 aa18.54■□□□□ 0.56
USP47-205ENST00000525257 FGF20Q9NP95 211 aaPredicted RBP18.54■□□□□ 0.56
USP47-205ENST00000525257 MRPS28Q9Y2Q9 187 aaKnown RBP18.54■□□□□ 0.56
USP47-205ENST00000525257 CSMD3Q7Z407 3707 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 GP9P14770 177 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 PPP1CCP36873 323 aaKnown RBP18.53■□□□□ 0.56
USP47-205ENST00000525257 SMN1Q16637 294 aaKnown RBP18.53■□□□□ 0.56
USP47-205ENST00000525257 ECSCRQ19T08 205 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 C5orf64Q2M2E5 130 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 GLIPR1L1Q6UWM5 242 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 TMPRSS11AQ6ZMR5 421 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 ODF3L1Q8IXM7 274 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 JAGN1Q8N5M9 183 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 NABP2Q9BQ15 211 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 BANF2Q9H503 90 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 ZMAT4Q9H898 229 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 CHCHD3Q9NX63 227 aaKnown RBP18.53■□□□□ 0.56
USP47-205ENST00000525257 CKLFQ9UBR5 152 aa18.53■□□□□ 0.56
USP47-205ENST00000525257 TRAV8-7A0A075B6U6 113 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 LOC100130705A0A1B0GUX0 176 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 UBE2QL1A1L167 161 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 TRIM64CA6NLI5 447 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 LINC01619G3V211 115 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 LIN54Q6MZP7 749 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 MINDY2Q8NBR6 621 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 CASTOR1Q8WTX7 329 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 MRPS24Q96EL2 167 aaKnown RBP18.52■□□□□ 0.56
USP47-205ENST00000525257 SELENOIQ9C0D9 397 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 STARD9Q9P2P6 4700 aa18.52■□□□□ 0.56
USP47-205ENST00000525257 TRBV5-5A0A0J9YX44 114 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 A0A1W2PN81 502 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 OGG1O15527 345 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 LALBAP00709 142 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 CHRNA7P36544 502 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms