RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 TRAV1-2A0A0B4J238 106 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 IGHV1-3A0A0C4DH29 117 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 FGF16O43320 207 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 IGKV1D-33P01593 117 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 IGKV1-33P01594 117 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 CD1BP29016 333 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 MORN2Q502X0 79 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 C6orf201Q7Z4U5 140 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 NDUFA11Q86Y39 141 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 OR4F17Q8NGA8 305 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 OR1L1Q8NH94 360 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 MRPL30Q8TCC3 161 aaKnown RBP13.01□□□□□ -0.33
LSM1-205ENST00000523511 FAM3DQ96BQ1 224 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 OR4F4Q96R69 305 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 GHITMQ9H3K2 345 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 RAB22AQ9UL26 194 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 HSF4Q9ULV5 492 aa13.01□□□□□ -0.33
LSM1-205ENST00000523511 TRDV1A0A1B0GX56 115 aa13□□□□□ -0.33
LSM1-205ENST00000523511 A0A1W2PPI3 338 aa13□□□□□ -0.33
LSM1-205ENST00000523511 NCBP2LA6PVI3 153 aaKnown RBP13□□□□□ -0.33
LSM1-205ENST00000523511 YPEL1O60688 119 aa13□□□□□ -0.33
LSM1-205ENST00000523511 QRFPP83859 136 aa13□□□□□ -0.33
LSM1-205ENST00000523511 UNC119Q13432 240 aa13□□□□□ -0.33
LSM1-205ENST00000523511 HNF4GQ14541 408 aa13□□□□□ -0.33
LSM1-205ENST00000523511 P2RY14Q15391 338 aa13□□□□□ -0.33
LSM1-205ENST00000523511 C2orf76Q3KRA6 126 aa13□□□□□ -0.33
LSM1-205ENST00000523511 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
LSM1-205ENST00000523511 UTF1Q5T230 341 aa13□□□□□ -0.33
LSM1-205ENST00000523511 LYG1Q8N1E2 194 aa13□□□□□ -0.33
LSM1-205ENST00000523511 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
LSM1-205ENST00000523511 OR51D1Q8NGF3 324 aa13□□□□□ -0.33
LSM1-205ENST00000523511 OR4X2Q8NGF9 303 aa13□□□□□ -0.33
LSM1-205ENST00000523511 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
LSM1-205ENST00000523511 SETD6Q8TBK2 473 aa13□□□□□ -0.33
LSM1-205ENST00000523511 RTN4IP1Q8WWV3 396 aaPredicted RBP13□□□□□ -0.33
LSM1-205ENST00000523511 YPEL2Q96QA6 119 aa13□□□□□ -0.33
LSM1-205ENST00000523511 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
LSM1-205ENST00000523511 NDUFB11Q9NX14 153 aa13□□□□□ -0.33
LSM1-205ENST00000523511 METTL21EPA6NDL7 271 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 MOSP00540 346 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 REG1BP48304 166 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 EBI3Q14213 229 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 CT45A1Q5HYN5 189 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 UBE2UQ5VVX9 321 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 CD200R1LQ6Q8B3 271 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 FOXRED2Q8IWF2 684 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 SPARTQ8N0X7 666 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 OR2AK2Q8NG84 335 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 CT45A3Q8NHU0 189 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 LPAR5Q9H1C0 372 aa12.99□□□□□ -0.33
LSM1-205ENST00000523511 CD28P10747 220 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 RAB3BP20337 219 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 GADD45AP24522 165 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 PSMB9P28065 219 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 VEGFCP49767 419 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 ZNF137PP52743 207 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 SLC35B1P78383 322 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 DIAPH2-AS1Q14236 149 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 Q6ZS46 218 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 IZUMO1Q8IYV9 350 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 CHPT1Q8WUD6 406 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 IL1F10Q8WWZ1 152 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
LSM1-205ENST00000523511 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 NICN1Q9BSH3 213 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 ABHD14AQ9BUJ0 271 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 SSR3Q9UNL2 185 aa12.98□□□□□ -0.33
LSM1-205ENST00000523511 TRBV6-6A0A0A6YYG2 114 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 TCRBV4S1A1TA0A5B7 111 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 HSPA12AO43301 675 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 LANCL1O43813 399 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 TSPAN15O95858 294 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 NAPSAO96009 420 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 ZBTB25P24278 435 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 ZNF134P52741 427 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 SSX1Q16384 188 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 HES5Q5TA89 166 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 C5orf56Q8N8D9 126 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 ZNF439Q8NDP4 499 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 OR52L2PQ8NGH6 319 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 S1PR3Q99500 378 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
LSM1-205ENST00000523511 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
LSM1-205ENST00000523511 C12orf4Q9NQ89 552 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 PIPOXQ9P0Z9 390 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
LSM1-205ENST00000523511 DSCAML1Q8TD84 2053 aa12.97□□□□□ -0.33
LSM1-205ENST00000523511 IFITM5A6NNB3 132 aa12.96□□□□□ -0.33
LSM1-205ENST00000523511 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
LSM1-205ENST00000523511 SOCS1O15524 211 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms