RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SP140LQ9H930 580 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 FAM206AQ9NX38 181 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 STEAP1Q9UHE8 339 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 NUFIP1Q9UHK0 495 aaKnown RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 OR52A1Q9UKL2 312 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 NOP16Q9Y3C1 178 aaKnown RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 TBL2Q9Y4P3 447 aaKnown RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 LRP12Q9Y561 859 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 HILPDAQ9Y5L2 63 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 HSPG2P98160 4391 aa5.15□□□□□ -1.58
SDCBP-210ENST00000522843 A0A0U1RQV5 110 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 LOC100506127A0A0U1RQW1 187 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 A0A1B0GTI1 187 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 TMEM269A0A1B0GVZ9 245 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PSMB11A5LHX3 300 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 OR2AT4A6NND4 320 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 DHRS7CA6NNS2 312 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 C17orf98A8MV24 154 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 CCL24O00175 119 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 AKR7A2O43488 359 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 TPPPO94811 219 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 CDRT1O95170 752 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 ARG1P05089 322 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 H2BFMP0C1H6 154 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PSG2P11465 335 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PTBP1P26599 531 aaKnown RBP eCLIP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 SDC2P34741 201 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 RPS27P42677 84 aaKnown RBP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 KIR3DL2P43630 455 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 RAB25P57735 213 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 LSM3P62310 102 aaKnown RBP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 C22orf42Q6IC83 251 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 DRAM2Q6UX65 266 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 LYPD6Q86Y78 171 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PARP16Q8N5Y8 322 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 ZFP41Q8N8Y5 198 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 TMEM185AQ8NFB2 350 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 OR11H6Q8NGC7 330 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 OR4M1Q8NGD0 313 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 S100ZQ8WXG8 99 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 RGP1Q92546 391 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 C10orf35Q96D05 121 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 NOL4LQ96MY1 436 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-210ENST00000522843 DERL3Q96Q80 235 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 ATF6BQ99941 703 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PDCD1LG2Q9BQ51 273 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 SOSTQ9BQB4 213 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 DCUN1D5Q9BTE7 237 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 TMED9Q9BVK6 235 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 BARHL1Q9BZE3 327 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 COMMD4Q9H0A8 199 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 RNF167Q9H6Y7 350 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF580Q9UK33 172 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 IKZF2Q9UKS7 526 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 HHLA2Q9UM44 414 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 PEX16Q9Y5Y5 336 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 MUC4Q99102 2169 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.59
SDCBP-210ENST00000522843 A0A087X0M5 115 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 A0A1B0GX30 115 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 MEX3AA1L020 520 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 LOC110117498-PIK3R3F6TDL0 507 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 M0R135 149 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 PDCD5O14737 125 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RPP14O95059 124 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 TTRP02766 147 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 UBCP0CG48 685 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 PGA5P0DJD9 388 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 IGFBP3P17936 291 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 AZGP1P25311 298 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 CD40LGP29965 261 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 SLC6A1P30531 599 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 TGFBR1P36897 503 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RANBP1P43487 201 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 OR3A4PP47883 348 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF45Q02386 682 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF260Q3ZCT1 412 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 HSD17B12Q53GQ0 312 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 AWAT2Q6E213 333 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 LIN54Q6MZP7 749 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 Q6ZWC4 215 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 CCDC190Q86UF4 302 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF695Q8IW36 515 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RPP25LQ8N5L8 163 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 CD177Q8N6Q3 437 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 OR5M8Q8NGP6 311 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 OR10Z1Q8NGY1 313 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 OR8S1Q8NH09 359 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 MCFD2Q8NI22 146 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 AP3S1Q92572 193 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 SPTSSAQ969W0 71 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 SDSLQ96GA7 329 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF799Q96GE5 643 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 PBOV1Q9GZY1 135 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RGCCQ9H4X1 137 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 EXOSC4Q9NPD3 245 aaKnown RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 CENPMQ9NSP4 180 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ZFP57Q9NU63 452 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 ABRACLQ9P1F3 81 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms