RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TLNRD1Q9H1K6 362 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR51I2Q9H344 312 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 FN3KRPQ9HA64 309 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PLEKHA1Q9HB21 404 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 NEK6Q9HC98 313 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 GPR173Q9NS66 373 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TMEM106BQ9NUM4 274 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 FOXJ3Q9UPW0 622 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 RP1L1Q8IWN7 2480 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 ARHGAP21Q5T5U3 1957 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LAMA5O15230 3695 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 IGKV1-27A0A075B6S5 117 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TRAV8-7A0A075B6U6 113 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PPIAL4EA0A075B759 164 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 IGHV4-30-2A0A087WSY4 118 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 A0A0B4J203 849 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TRAV1-2A0A0B4J238 106 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 IGHV3-64DA0A0J9YX35 117 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 C13orf42A0A1B0GVH6 325 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 FAM230AA0A1W2PPH8 454 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 A0A1W2PRV1 198 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CLDN25C9JDP6 229 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PPIAL4DF5H284 164 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LYNX1G3V0Z9 82 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 J3QT63 122 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LGALS8O00214 317 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NDUFS8O00217 210 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CCRL2O00421 344 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GABRPO00591 440 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 MAGEB3O15480 346 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PPIHO43447 177 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 SULT1B1O43704 296 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NOS1APO75052 506 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 SC5DO75845 299 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ARL6IP5O75915 188 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CYB5R3P00387 301 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 UCHL1P09936 223 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 OCMP0CE72 109 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 PPIAL4FP0DN26 164 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LYNX1P0DP58 116 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CD37P11049 281 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 SLC25A16P16260 332 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CD36P16671 472 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 SRMP19623 302 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 MAPK3P27361 379 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 DUTP33316 252 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 GPR6P46095 362 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 IER3P46695 156 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 HAAOP46952 286 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 OR3A1P47881 315 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ALDH3B2P48448 385 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 RBP2P50120 134 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GPM6AP51674 278 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ATP1B3P54709 279 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 XGP55808 180 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 FABP5Q01469 135 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LOXL1Q08397 574 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 IL24Q13007 206 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ZNF154Q13106 437 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PDZK1IP1Q13113 114 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 INSL4Q14641 139 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NEDD8Q15843 81 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CARTPTQ16568 116 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 HIGD2BQ4VC39 106 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 HSD17B12Q53GQ0 312 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PRAMEF6Q5VXH4 476 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ASPHD2Q6ICH7 369 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CD200R1LQ6Q8B3 271 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 WDR82Q6UXN9 313 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ASCL4Q6XD76 172 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GDPGP1Q6ZNW5 385 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ZNF826PQ6ZT77 177 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LRRC28Q86X40 367 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 ANGPTL5Q86XS5 388 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TGIF2LYQ8IUE0 185 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 MKXQ8IYA7 352 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 SAXO1Q8IYX7 474 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LRTM2Q8N967 370 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ZSCAN4Q8NAM6 433 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 OR51A2Q8NGJ7 313 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 OR13C9Q8NGT0 318 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 OR10Z1Q8NGY1 313 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ZNF420Q8TAQ5 688 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 TRMT10AQ8TBZ6 339 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 NPRL2Q8WTW4 380 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 LRRC29Q8WV35 223 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 AQP3Q92482 292 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 RAB1CQ92928 201 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 YIPF6Q96EC8 236 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 BORCS8Q96FH0 119 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CPNE2Q96FN4 548 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 TIMD4Q96H15 378 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NRIP2Q9BQI9 281 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 ALKBH7Q9BT30 221 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 MRPS26Q9BYN8 205 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 REG4Q9BYZ8 158 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PKIBQ9C010 78 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms