RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TESK1Q15569 626 aa8.65□□□□□ -1.02
MCF2-209ENST00000520602 OR8G5Q8NG78 346 aa8.65□□□□□ -1.02
MCF2-209ENST00000520602 RXFP4Q8TDU9 374 aa8.65□□□□□ -1.02
MCF2-209ENST00000520602 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
MCF2-209ENST00000520602 IGLV3-1P01715 115 aa8.65□□□□□ -1.03
MCF2-209ENST00000520602 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.03
MCF2-209ENST00000520602 NTNG2Q96CW9 530 aa8.65□□□□□ -1.03
MCF2-209ENST00000520602 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.03
MCF2-209ENST00000520602 KPTNQ9Y664 436 aa8.65□□□□□ -1.03
MCF2-209ENST00000520602 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
MCF2-209ENST00000520602 FCGR3BO75015 233 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 RAB5BP61020 215 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 UBE2KP61086 200 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 COL10A1Q03692 680 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 RBPJQ06330 500 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 RHEBQ15382 184 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 GABRA6Q16445 453 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 LINC00596Q86U02 117 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 SELENOHQ8IZQ5 122 aaKnown RBP8.64□□□□□ -1.03
MCF2-209ENST00000520602 TMEM252Q8N6L7 170 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 GALNT14Q96FL9 552 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
MCF2-209ENST00000520602 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 SYNGR2O43760 224 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 IFNA1P01562 189 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 UCP3P55916 312 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 P2RY6Q15077 328 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 ABHD14BQ96IU4 210 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 LIME1Q9H400 295 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 VPS13AQ96RL7 3174 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 TRAV24A0A0B4J272 114 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 UBE2L5PA0A1B0GUS4 154 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 ST8SIA5O15466 376 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 MUC1P15941 1255 aaPredicted RBP8.64□□□□□ -1.03
MCF2-209ENST00000520602 G6PCP35575 357 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 RAB11AP62491 216 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 OR51I2Q9H344 312 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 URGCP-MRPS24S4R325 110 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 GTF3C1Q12789 2109 aa8.64□□□□□ -1.03
MCF2-209ENST00000520602 HBZP02008 142 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 HBE1P02100 147 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 ATP6V0CP27449 155 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 RAB5CP51148 216 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 DVL1P1P54792 670 aaPredicted RBP8.63□□□□□ -1.03
MCF2-209ENST00000520602 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
MCF2-209ENST00000520602 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 RAB40CQ96S21 281 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 TP53TG5Q9Y2B4 290 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 OOEPA6NGQ2 149 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 TMEM210A6NLX4 147 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 DBX1A6NMT0 343 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 PRDX2P32119 198 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 GLIPR1P48060 266 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 PDLIM3Q53GG5 364 aaPredicted RBP8.63□□□□□ -1.03
MCF2-209ENST00000520602 ADAM5Q6NVV9 412 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
MCF2-209ENST00000520602 S100PBPQ96BU1 408 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 TLNRD1Q9H1K6 362 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 SMCO4Q9NRQ5 59 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 FAM74A7A6NL05 159 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 A8MXK9 166 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 HOXA1P49639 335 aaPredicted RBP8.63□□□□□ -1.03
MCF2-209ENST00000520602 GNG10P50151 68 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 COLCA1Q6ZS62 124 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 LFNGQ8NES3 379 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 OR10P1Q8NGE3 313 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 GPR146Q96CH1 333 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 SPRY4Q9C004 299 aa8.63□□□□□ -1.03
MCF2-209ENST00000520602 A0A1W2PPV4 95 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 LRRC30A6NM36 301 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 DAOP14920 347 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
MCF2-209ENST00000520602 SULT1A2P50226 295 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 ACSF3Q4G176 576 aaPredicted RBP8.62□□□□□ -1.03
MCF2-209ENST00000520602 PUSL1Q8N0Z8 303 aaKnown RBP8.62□□□□□ -1.03
MCF2-209ENST00000520602 OR2V2Q96R30 315 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 ZDHHC11Q9H8X9 412 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 COL4A2P08572 1712 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 AKAP6Q13023 2319 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 H0Y980 276 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 AQP7O14520 342 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 KIR2DL2P43627 348 aaPredicted RBP8.62□□□□□ -1.03
MCF2-209ENST00000520602 KCNJ3P48549 501 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 CLRN3Q8NCR9 226 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 LHFPL5Q8TAF8 219 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
MCF2-209ENST00000520602 S1PR3Q99500 378 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms