RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 IMMP2LQ96T52 175 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 FAM206AQ9NX38 181 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC17A4Q9Y2C5 497 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 NBEAQ8NFP9 2946 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 AADACP22760 399 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 GABRA2P47869 451 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 QRFPP83859 136 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF266Q14584 549 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 GTF2H5Q6ZYL4 71 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 TM4SF19Q96DZ7 209 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 RPRMQ9NS64 109 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 TIMM8BQ9Y5J9 83 aaPredicted RBP8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 LRRC3CA6NJW4 275 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 SUMO1P63165 101 aaKnown RBP8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 RAB30Q15771 203 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 FAM69BQ5VUD6 431 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 PRSS57Q6UWY2 283 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 POM121L2Q96KW2 1035 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 SAMD10Q9BYL1 202 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 RBKSQ9H477 322 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 VAX2Q9UIW0 290 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 ANXA10Q9UJ72 324 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 RBPJQ06330 500 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 Q6ZSR6 202 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 FBXL14Q8N1E6 418 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 LHX4Q969G2 390 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 ATP5SQ99766 215 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 HDAC8Q9BY41 377 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 METTL7AQ9H8H3 244 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 KLRF1Q9NZS2 232 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 TBX21Q9UL17 535 aa8.74□□□□□ -1.01
PDGFRB-207ENST00000520579 FRYLO94915 3013 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 K7EQM0 130 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 NUPR1O60356 82 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 IL24Q13007 206 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 IL15RAQ13261 267 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 ELSPBP1Q96BH3 223 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 RBMXL1Q96E39 390 aaKnown RBP8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 LYRM2Q9NU23 88 aaPredicted RBP8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 PLEK2Q9NYT0 353 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 KIAA1456Q9P272 454 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 IGHV2-70DA0A0C4DH43 119 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 A0A1W2PRS3 328 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 CRYM-AS1A6NIL9 109 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 FOXS1O43638 330 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 RPL24P83731 157 aaKnown RBP8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 CLDND2Q8NHS1 167 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF519Q8TB69 540 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 TRAV30A0A087WSZ9 112 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 KIR2DL5BA0A0G2JN68 375 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 KIR2DL5BA0A0G2JPC4 375 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 SEMA4FO95754 770 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 LMO1P25800 156 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 APOBEC3AP31941 199 aaPredicted RBP8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM187Q14656 261 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF776Q68DI1 518 aaPredicted RBP8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 SAXO1Q8IYX7 474 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 KIR2DL5AQ8N109 375 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 CRIPAKQ8N1N5 446 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF286AQ9HBT8 521 aa8.73□□□□□ -1.01
PDGFRB-207ENST00000520579 GDF9O60383 454 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 PDGFBP01127 241 aaPredicted RBP8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 APODP05090 189 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 THBS3P49746 956 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 CLDN18P56856 261 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM164Q5U3C3 297 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 LHFPL1Q86WI0 220 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 DTX1Q86Y01 620 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 MOB3AQ96BX8 217 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 PRSS50Q9UI38 385 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 PILRBQ9UKJ0 227 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 TNFSF13O75888 250 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM50AO95807 157 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC35B1P78383 322 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 FOXF1Q12946 379 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 AMMECR1LQ6DCA0 310 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 OR13H1Q8NG92 308 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 RHBDD1Q8TEB9 315 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 FAM222BQ8WU58 562 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC39A9Q9NUM3 307 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 ABCA1O95477 2261 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 IGHV2OR16-5A0A0B4J2B6 119 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 PROB1E7EW31 1015 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 EFEMP2O95967 443 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 AZU1P20160 251 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 MYBPHQ13203 477 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 C9orf135Q5VTT2 229 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 FLVCR1-AS1Q8TAF5 88 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 NECAP2Q9NVZ3 263 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 LHFPL6Q9Y693 200 aa8.72□□□□□ -1.01
PDGFRB-207ENST00000520579 RALGAPA1Q6GYQ0 2036 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms