RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MRPS25P82663 173 aaKnown RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 OR2F1Q13607 317 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LINC00483Q53H64 154 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 N4BP2L1Q5TBK1 243 aaPredicted RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 ELP2Q6IA86 826 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 Q6ZRU5 148 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 COMMD7Q86VX2 200 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 TRAPPC5Q8IUR0 188 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 ZBTB8OSQ8IWT0 167 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LRRC34Q8IZ02 419 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 H1FOOQ8IZA3 346 aaPredicted RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 KRT222Q8N1A0 295 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 TMEM161BQ8NDZ6 487 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 OR9I1Q8NGQ6 314 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 OR2K2Q8NGT1 345 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 JOSD2Q8TAC2 188 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 C2orf15Q8WU43 125 aaKnown RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 ITLN2Q8WWU7 325 aaPredicted RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 ANP32BQ92688 251 aaKnown RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 TMA16Q96EY4 203 aaKnown RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 EIF5A2Q9GZV4 153 aaKnown RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 SLC2A9Q9NRM0 540 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LINC00527Q9UJ94 153 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 ALG5Q9Y673 324 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 NACAE9PAV3 2078 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LTBP4Q8N2S1 1624 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 CABIN1Q9Y6J0 2220 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 MYO10Q9HD67 2058 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 GOLGA6L4A6NEF3 574 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 ZNF850A8MQ14 1090 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 D6RAR5 112 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 SULT1B1O43704 296 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 KCNK2O95069 426 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 WISP3O95389 354 aaPredicted RBP2.42□□□□□ -2.02
SQLE-204ENST00000520493 LTAP01374 205 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 TCRBP04435 133 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 SLC35A2P78381 396 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 AESQ08117 197 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 EIF4EBP1Q13541 118 aaPredicted RBP2.42□□□□□ -2.02
SQLE-204ENST00000520493 EBI3Q14213 229 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 TRMT12Q53H54 448 aaKnown RBP2.42□□□□□ -2.02
SQLE-204ENST00000520493 LCN8Q6JVE9 175 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 RASSF6Q6ZTQ3 369 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 APCDD1LQ8NCL9 501 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 OR8S1Q8NH09 359 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 RTN4IP1Q8WWV3 396 aaPredicted RBP2.42□□□□□ -2.02
SQLE-204ENST00000520493 STARD4Q96DR4 205 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 IMP4Q96G21 291 aaKnown RBP2.42□□□□□ -2.02
SQLE-204ENST00000520493 REEP6Q96HR9 211 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 PYURFQ96I23 114 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 PRAP1Q96NZ9 151 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 GNB1LQ9BYB4 327 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 GTSF1LQ9H1H1 148 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 HES4Q9HCC6 221 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 DKKL1Q9UK85 242 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 SLC22A7Q9Y694 548 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 RIMBP3CA6NJZ7 1639 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 RIMBP3BA6NNM3 1639 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 KDM6BO15054 1643 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 RIMBP3Q9UFD9 1639 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 ADGRL3Q9HAR2 1447 aa2.42□□□□□ -2.02
SQLE-204ENST00000520493 KMT2EQ8IZD2 1858 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 ZNF462Q96JM2 2506 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 IGKV2-28A0A075B6P5 120 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 IGLL5B9A064 214 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 KPNA3O00505 521 aaPredicted RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 CDRT1O95170 752 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 NSA2O95478 260 aaKnown RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 KRT75O95678 551 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 IGKV2D-28P01615 120 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 IL4P05112 153 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 FBP1P09467 338 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 CXCL2P19875 107 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 CXCL3P19876 107 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 HSD11B1P28845 292 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 PSMB3P49720 205 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 SULT1A1P50225 295 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 SULT1A2P50226 295 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 RAB5BP61020 215 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 NAA20P61599 178 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 RPS24P62847 133 aaKnown RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 HPCAP84074 193 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 TSPAN31Q12999 210 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 SRSF6Q13247 344 aaKnown RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 ENDOGQ14249 297 aaKnown RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 PTGES3Q15185 160 aaKnown RBP2.41□□□□□ -2.02
SQLE-204ENST00000520493 ZCWPW2Q504Y3 356 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 C1orf195Q5TG92 126 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 SLC51BQ86UW2 128 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 GID4Q8IVV7 300 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 TMEM105Q8N8V8 129 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
SQLE-204ENST00000520493 ZNRF2Q8NHG8 242 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms