RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 DIMT1Q9UNQ2 313 aaKnown RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 POLDIP2Q9Y2S7 368 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 CAB39Q9Y376 341 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 EXOSC1Q9Y3B2 195 aaKnown RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 INSIG2Q9Y5U4 225 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 AUP1Q9Y679 476 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TRAV34A0A0B4J273 112 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 IGHV2-70DA0A0C4DH43 119 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 TRBV2A0A0J9YWF9 115 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 KIR2DS1A0A191URI9 304 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OR2AT4A6NND4 320 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 NDUFB3O43676 98 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 SYNGR1O43759 233 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 ENSAO43768 121 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 FCGR3BO75015 233 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OCM2P0CE71 109 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OCMP0CE72 109 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PIPP12273 146 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PRKACBP22694 351 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 GLRA1P23415 457 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 DUTP33316 252 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 GTF2A1P52655 376 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 AQP4P55087 323 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PAX2Q02962 417 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PAX8Q06710 450 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 SCGB2A2Q13296 93 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OPCMLQ14982 345 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 CCDC58Q4VC31 144 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OR2G6Q5TZ20 316 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 STUMQ69YW2 141 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 LAIR2Q6ISS4 152 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 RPL22L1Q6P5R6 122 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 FIP1L1Q6UN15 594 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 UTS2BQ765I0 119 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 SLC36A1Q7Z2H8 476 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 ANGPTL5Q86XS5 388 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 STX19Q8N4C7 294 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OR51A4Q8NGJ6 313 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 OR10AC1Q8NH08 325 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 NANPQ8TBE9 248 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 TRMT10AQ8TBZ6 339 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 TMIGD2Q96BF3 282 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 ADAT3Q96EY9 351 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PDCD1LG2Q9BQ51 273 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 NRIP2Q9BQI9 281 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PKIBQ9C010 78 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 COMMD4Q9H0A8 199 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 CNOT2Q9NZN8 540 aaKnown RBP5.54□□□□□ -1.52
SDCBP-208ENST00000520228 CTSZQ9UBR2 303 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 CLEC2DQ9UHP7 191 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 PSORS1C1Q9UIG5 152 aa5.54□□□□□ -1.52
SDCBP-208ENST00000520228 MXRA5Q9NR99 2828 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 IGKV1-9A0A0C4DH69 117 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 A0A1B0GW55 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 NKX6-3A6NJ46 265 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 C15orf61A6NNL5 157 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 F8VVB4 439 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 F8VWA3 439 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 NOS1APO75052 506 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-208ENST00000520228 NXPH2O95156 264 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ATP6V1G2O95670 118 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ECDO95905 644 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L2P0CJ85 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L3P0CJ86 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L4P0CJ87 422 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L5P0CJ88 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L6P0CJ89 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L7P0CJ90 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 PGA5P0DJD9 388 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 PSG2P11465 335 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ATF1P18846 271 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 GABRA2P47869 451 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 HSPA13P48723 471 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 RBP2P50120 134 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ATP1B3P54709 279 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 IL24Q13007 206 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 RIPK1Q13546 671 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 SMIM21Q3B7S5 101 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 C14orf177Q52M58 125 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 LRRC10Q5BKY1 277 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 XAF1Q6GPH4 301 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-208ENST00000520228 BTNL8Q6UX41 500 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 IZUMO2Q6UXV1 221 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 Q6ZRP5 223 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 SLC25A26Q70HW3 274 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 AHSA2Q719I0 299 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 CALHM1Q8IU99 346 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 SERPINA12Q8IW75 414 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 FAM89BQ8N5H3 189 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 FAM216BQ8N7L0 139 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 LRTM2Q8N967 370 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 OR5D14Q8NGL3 314 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 OR52N1Q8NH53 320 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ANGPTL6Q8NI99 470 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 TSEN15Q8WW01 171 aaKnown RBP5.53□□□□□ -1.52
SDCBP-208ENST00000520228 CORO2AQ92828 525 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 BORCS8Q96FH0 119 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF488Q96MN9 340 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 NKX3-1Q99801 234 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms