RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 KPTNQ9Y664 436 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 ATP23Q9Y6H3 246 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 ESPL1Q14674 2120 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 MED12LQ86YW9 2145 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 MYO15AQ9UKN7 3530 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 CACNA1GO43497 2377 aa4.29□□□□□ -1.72
SDC2-204ENST00000519914 CNTRLQ7Z7A1 2325 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZNF407Q9C0G0 2248 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 IGKV1-6A0A0C4DH72 117 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 A0A1B0GV90 55 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 A0A1W2PN81 502 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 SLC22A20A6NK97 555 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 CD300LBA8K4G0 201 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZNF732B4DXR9 585 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 DEGS1O15121 323 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 HSPA12AO43301 675 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MED6O75586 246 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 TK1P04183 234 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 CRYBA1P05813 215 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 SP1P08047 785 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 JMJD7P0C870 316 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 RNF224P0DH78 156 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 RCC1P18754 421 aaPredicted RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 BCL3P20749 454 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 AGAP20933 346 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 VDAC1P21796 283 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ITGA3P26006 1051 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 CD82P27701 267 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 BMI1P35226 326 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MAS1LP35410 378 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 APLNRP35414 380 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 CHRNA7P36544 502 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 SNCAP37840 140 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 NPBWR2P48146 333 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 CEBPGP53567 150 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ERVK11-1P61568 191 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 NUTF2P61970 127 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 GNG3P63215 75 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 DLK1P80370 383 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 HERPUD1Q15011 391 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MSMO1Q15800 293 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 DMRTC1Q5HYR2 192 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 DPPA3Q6W0C5 159 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 Q6ZRG5 221 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 SLC16A13Q7RTY0 426 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MRPL21Q7Z2W9 205 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 NUFIP2Q7Z417 695 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 P4HA3Q7Z4N8 544 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZNF573Q86YE8 665 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 TUSC5Q8IXB3 177 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 Q8IYB0 196 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 H1FOOQ8IZA3 346 aaPredicted RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 SLC35G3Q8N808 338 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 TMEM105Q8N8V8 129 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 OR52M1Q8NGK5 317 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 OR5L1Q8NGL2 311 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 OR5D13Q8NGL4 314 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 OR1K1Q8NGR3 316 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 PLPPR1Q8TBJ4 325 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MRPL30Q8TCC3 161 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 DYRK2Q92630 601 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 TOMM40LQ969M1 308 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 APH1AQ96BI3 265 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 MBD6Q96DN6 1003 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 FER1L6-AS2Q96M78 137 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 TP53RKQ96S44 253 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 SLC25A31Q9H0C2 315 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 OR51I2Q9H344 312 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZNF442Q9H7R0 627 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 ZDHHC11Q9H8X9 412 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 GLRX2Q9NS18 164 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 LYRM2Q9NU23 88 aaPredicted RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 FOXJ2Q9P0K8 574 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 LSM5Q9Y4Y9 91 aaKnown RBP4.28□□□□□ -1.72
SDC2-204ENST00000519914 X6R8D5 127 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 AHCTF1Q8WYP5 2266 aa4.28□□□□□ -1.72
SDC2-204ENST00000519914 WDFY3Q8IZQ1 3526 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 KNTC1P50748 2209 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TRAV24A0A0B4J272 114 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 A0A1B0GU03 582 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 C5orf49A4QMS7 147 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 PCNX2A6NKB5 2137 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 A8MXE2 369 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TRAPPC2LH3BP13 241 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 KLRC4-KLRK1H3BQV0 150 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 J3QT63 122 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 CDX4O14627 284 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 SIGLEC5O15389 551 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms