RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 FAM46BQ96A09 425 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 S1PR3Q99500 378 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 SULT4A1Q9BR01 284 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 ZNF251Q9BRH9 671 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 ALX4Q9H161 411 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-213ENST00000519848 METTL9Q9H1A3 318 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 IFI27L2Q9H2X8 130 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 BABAM2Q9NXR7 383 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 MRPS28Q9Y2Q9 187 aaKnown RBP6.73□□□□□ -1.33
PABPC1-213ENST00000519848 ZNF281Q9Y2X9 895 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 LSM2Q9Y333 95 aaKnown RBP6.73□□□□□ -1.33
PABPC1-213ENST00000519848 PCDHGB5Q9Y5G0 923 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 ORC6Q9Y5N6 252 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 NBEAL2Q6ZNJ1 2754 aa6.73□□□□□ -1.33
PABPC1-213ENST00000519848 FUOMA2VDF0 154 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 ATP6V0E1O15342 81 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MPZL2O60487 215 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 BAG2O95816 211 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MAS1P04201 325 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 FAM106CPP0CH98 169 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MGMTP16455 207 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MYF6P23409 242 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 PSMB8P28062 276 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MNDAP41218 407 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 RAB7AP51149 207 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 GNB1P62873 340 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 SSBP2P81877 361 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 QRFPP83859 136 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 ST3GAL4Q11206 333 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 Q499Y3 187 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 RAB12Q6IQ22 244 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 CCDC144NLQ6NUI1 221 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 AHSA2Q719I0 299 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 TGIF2LXQ8IUE1 241 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 PRR18Q8N4B5 295 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 OR10A7Q8NGE5 316 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 OR10X1Q8NGY0 326 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 NRG4Q8WWG1 115 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 CYGBQ8WWM9 190 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 TFAP2CQ92754 450 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 C5orf30Q96GV9 206 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 DCLRE1BQ9H816 532 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 GAR1Q9NY12 217 aaKnown RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 NKX1-2Q9UD57 310 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 PSORS1C1Q9UIG5 152 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
PABPC1-213ENST00000519848 AMMECR1Q9Y4X0 333 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
PABPC1-213ENST00000519848 IGHV7-81A0A0B4J1V7 117 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-213ENST00000519848 M0QZK8 103 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 CCL24O00175 119 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 ORC5O43913 435 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 EGR2P11161 476 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-213ENST00000519848 DCKP27707 260 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 CHATP28329 748 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 HTR2CP28335 458 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 KCNJ3P48549 501 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 DEFA5Q01523 94 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 MRPL28Q13084 256 aaKnown RBP6.71□□□□□ -1.34
PABPC1-213ENST00000519848 RCN1Q15293 331 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 HMGN3Q15651 99 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 MORN2Q502X0 79 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 VAX1Q5SQQ9 334 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 ZNF695Q8IW36 515 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 JAGN1Q8N5M9 183 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 C8orf31Q8N9H6 132 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 ZNF565Q8N9K5 539 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 OR52M1Q8NGK5 317 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 HAVCR2Q8TDQ0 301 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 CHPT1Q8WUD6 406 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 AKR1E2Q96JD6 320 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 OR5B12Q96R08 314 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 B9D2Q9BPU9 175 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 NABP2Q9BQ15 211 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 BARHL1Q9BZE3 327 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 SELENOIQ9C0D9 397 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 OR1A1Q9P1Q5 309 aa6.71□□□□□ -1.34
PABPC1-213ENST00000519848 EXOSC1Q9Y3B2 195 aaKnown RBP6.71□□□□□ -1.34
PABPC1-213ENST00000519848 SAA2-SAA4A0A096LPE2 208 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 IGKV1-6A0A0C4DH72 117 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 SHISA3A0PJX4 238 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 NCBP2LA6PVI3 153 aaKnown RBP6.7□□□□□ -1.34
PABPC1-213ENST00000519848 NUDT19A8MXV4 375 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 I3L521 148 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 LANCL1O43813 399 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 MOSP00540 346 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 IGHG4P01861 327 aa6.7□□□□□ -1.34
PABPC1-213ENST00000519848 GAPDHP04406 335 aaKnown RBP6.7□□□□□ -1.34
PABPC1-213ENST00000519848 SAA2P0DJI9 122 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-213ENST00000519848 GTF2F2P13984 249 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms