RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 Q8WTZ3 238 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 FRZBQ92765 325 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 TSC22D3Q99576 134 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 SPIN2AQ99865 258 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 SPIN2BQ9BPZ2 258 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 SLC19A3Q9BZV2 496 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 RPF2Q9H7B2 306 aaKnown RBP3.1□□□□□ -1.91
CHD1-209ENST00000512844 SMPXQ9UHP9 88 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 UTP11Q9Y3A2 253 aaKnown RBP3.1□□□□□ -1.91
CHD1-209ENST00000512844 PCDH11XQ9BZA7 1347 aa3.1□□□□□ -1.91
CHD1-209ENST00000512844 PARP4Q9UKK3 1724 aaKnown RBP3.1□□□□□ -1.91
CHD1-209ENST00000512844 FRMPD3Q5JV73 1810 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 CAMTA1Q9Y6Y1 1673 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 PVALEFA0A1B0GWK0 134 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 CIB4A0PJX0 185 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 NCBP2LA6PVI3 153 aaKnown RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 BTNL10A8MVZ5 291 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 I3L4J1 428 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 HAND1O96004 215 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 PAEPP09466 180 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 IGHV3-43DP0DP04 118 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 ERGP11308 486 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 GABRG2P18507 467 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 CCR7P32248 378 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 HSPA9P38646 679 aaKnown RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 GCLMP48507 274 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 PSMB2P49721 201 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 UBE2E1P51965 193 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 HIST1H3AP68431 136 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 H3F3AP84243 136 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 FLI1Q01543 452 aaPredicted RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 FZD2Q14332 565 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 PMVKQ15126 192 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 EPGNQ6UW88 154 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 FAM183BPQ6ZVS7 135 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 HIST2H3AQ71DI3 136 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 OLIG3Q7RTU3 272 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 DPPA2Q7Z7J5 298 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 LYPD1Q8N2G4 141 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 ZADH2Q8N4Q0 377 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 OR4P4Q8NGL7 312 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 MFSD8Q8NHS3 518 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 MCFD2Q8NI22 146 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 ASB13Q8WXK3 278 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 C12orf43Q96C57 262 aaKnown RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 PGLYRP3Q96LB9 341 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 UBE2E2Q96LR5 201 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 RDH12Q96NR8 316 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 C20orf144Q9BQM9 153 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 FAAP24Q9BTP7 215 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 TMEM109Q9BVC6 243 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 TIPINQ9BVW5 301 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 SUCNR1Q9BXA5 334 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 MS4A6AQ9H2W1 248 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 TXNIPQ9H3M7 391 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 ZNF430Q9H8G1 570 aaPredicted RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 NOX3Q9HBY0 568 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 BIN3Q9NQY0 253 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 DOK5Q9P104 306 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 RPL26L1Q9UNX3 145 aaKnown RBP3.09□□□□□ -1.91
CHD1-209ENST00000512844 GINS2Q9Y248 185 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 POLR1DQ9Y2S0 133 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 HSPB11Q9Y547 144 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 ALG5Q9Y673 324 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 TIAM2Q8IVF5 1701 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 LAMB4A4D0S4 1761 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 LTN1O94822 1766 aa3.09□□□□□ -1.91
CHD1-209ENST00000512844 BCL9LQ86UU0 1499 aa3.09□□□□□ -1.92
CHD1-209ENST00000512844 ADAMTS7Q9UKP4 1686 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 C4AP0C0L4 1744 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 C4BP0C0L5 1744 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 AFDNP55196 1824 aaKnown RBP3.08□□□□□ -1.92
CHD1-209ENST00000512844 A0A0G2JMP0 313 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 CENPVL3A0A0U1RRI6 287 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 SMIM9A6NGZ8 99 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 METTL15A6NJ78 407 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 ZNF726A6NNF4 738 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 OR11H12B2RN74 326 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 PPP5D1E7EU14 171 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 UPK2O00526 184 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 RDH16O75452 317 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 IFNA1P01562 189 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 IGLV2-23P01705 113 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 RAB3BP20337 219 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 HIST1H1TP22492 207 aaPredicted RBP3.08□□□□□ -1.92
CHD1-209ENST00000512844 OMGP23515 440 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 PAX6P26367 422 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 RPL5P46777 297 aaKnown RBP3.08□□□□□ -1.92
CHD1-209ENST00000512844 FGF8P55075 233 aaPredicted RBP3.08□□□□□ -1.92
CHD1-209ENST00000512844 TMEM33P57088 247 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 MXD1Q05195 221 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 LAMTOR4Q0VGL1 99 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 AQP6Q13520 282 aa3.08□□□□□ -1.92
CHD1-209ENST00000512844 PPP1R1AQ13522 171 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms