RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SLC18A1P54219 525 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 RAP1AP62834 184 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 Q499Y3 187 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 TNFAIP8L3Q5GJ75 292 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 MORN5Q5VZ52 161 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 TRPT1Q86TN4 253 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 C20orf196Q8IYI0 205 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 DCAF4L2Q8NA75 395 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 DCUN1D4Q92564 292 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 ATXN7L3BQ96GX2 97 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 MOB1AQ9H8S9 216 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 CACYBPQ9HB71 228 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 MED11Q9P086 117 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 FAM135BQ49AJ0 1406 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 IGHV1OR15-1A0A075B7D0 117 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 C5orf49A4QMS7 147 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 NKX2-6A6NCS4 301 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 H3BSA7 217 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 COPEO14579 308 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 BANF1O75531 89 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 GADD45GO95257 159 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 OR4Q2P0C623 313 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 CERS1P27544 350 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 PROK1P58294 105 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 FABP5Q01469 135 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 IFITM3Q01628 133 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 ARFRP1Q13795 201 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 C12orf74Q32Q52 190 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 RNF212Q495C1 297 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 VN1R4Q7Z5H5 301 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 SNX29P2Q8IUI4 249 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 GDPD1Q8N9F7 314 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 ZIC4Q8N9L1 334 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 GALNT14Q96FL9 552 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 OR7D2Q96RA2 312 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 ZNF649Q9BS31 505 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 NDFIP1Q9BT67 221 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 SPHK2Q9NRA0 654 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 TNFSF18Q9UNG2 199 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 ABCC12Q96J65 1359 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 RAPGEF2Q9Y4G8 1499 aa4.79□□□□□ -1.64
CHD1-208ENST00000512392 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 A0A087WUU8 490 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 LOC102724200A0A096LPH7 203 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 CIB4A0PJX0 185 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 KLLNB2CW77 178 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 F6UZH7 168 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 SAP18O00422 153 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 MYL12BO14950 172 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 NPY1RP25929 384 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 POLR2IP36954 125 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 POLR2HP52434 150 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 DAD1P61803 113 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 RBMY1FQ15415 496 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 KIAA1644Q3SXP7 199 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 HRCT1Q6UXD1 115 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 ACP7Q6ZNF0 438 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 SGPP2Q8IWX5 399 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 TMEM86AQ8N2M4 240 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 KRTCAP2Q8N6L1 136 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 LY6G5BQ8NDX9 201 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 ZNF420Q8TAQ5 688 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 FNDC9Q8TBE3 224 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 DEFB127Q9H1M4 99 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 MMP26Q9NRE1 261 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 ZNF230Q9UIE0 474 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 TRAPPC2LQ9UL33 140 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 SLC25A15Q9Y619 301 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 PXMP4Q9Y6I8 212 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 UHRF1BP1LA0JNW5 1464 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 HECW1Q76N89 1606 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 A0A1B0GW64 132 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 EPOPA6NHQ4 379 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 CLDN25C9JDP6 229 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 SS18L1O75177 396 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 CD48P09326 243 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 S100A11P31949 105 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 TNFAIP6P98066 277 aaPredicted RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 BATFQ16520 125 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 TAF9Q16594 264 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 Q6ZSR6 202 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 C11orf53Q8IXP5 236 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 TMEM75Q8N9X5 138 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 OR1L1Q8NH94 360 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 CT55Q8WUE5 264 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 NEURL3Q96EH8 262 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 C19orf24Q9BVV8 132 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 CDC42EP4Q9H3Q1 356 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 TMEM38BQ9NVV0 291 aa4.78□□□□□ -1.64
CHD1-208ENST00000512392 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
CHD1-208ENST00000512392 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
CHD1-208ENST00000512392 FAM135AQ9P2D6 1515 aa4.77□□□□□ -1.65
CHD1-208ENST00000512392 BCL9O00512 1426 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms