RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 GNG12Q9UBI6 72 aa9.83□□□□□ -0.84
PDPN-208ENST00000509009 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
PDPN-208ENST00000509009 CRTAPO75718 401 aaPredicted RBP9.82□□□□□ -0.84
PDPN-208ENST00000509009 GP2P55259 537 aaKnown RBP9.82□□□□□ -0.84
PDPN-208ENST00000509009 WNT4P56705 351 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 TMEM30BQ3MIR4 351 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 MORN2Q502X0 79 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 TRAT1Q6PIZ9 186 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 AHSA2Q719I0 299 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 PRR18Q8N4B5 295 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 BPIFB6Q8NFQ5 453 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 OR8H1Q8NGG4 311 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 DUX3Q96PT4 197 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 RASL11BQ9BPW5 248 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 UQCC2Q9BRT2 126 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 GPR61Q9BZJ8 451 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 DCLRE1BQ9H816 532 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 TAF9BQ9HBM6 251 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 OR2S2Q9NQN1 319 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 MBNL3Q9NUK0 354 aaKnown RBP9.82□□□□□ -0.84
PDPN-208ENST00000509009 FKBP14Q9NWM8 211 aa9.82□□□□□ -0.84
PDPN-208ENST00000509009 CCL24O00175 119 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 MYL12BO14950 172 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 TXNL1O43396 289 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 LANCL1O43813 399 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 PDCD6O75340 191 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 RPLP1P05386 114 aaKnown RBP9.81□□□□□ -0.84
PDPN-208ENST00000509009 GPR50Q13585 617 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 INSL4Q14641 139 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 OGFRL1Q5TC84 451 aaPredicted RBP9.81□□□□□ -0.84
PDPN-208ENST00000509009 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 FAM71E2Q8N5Q1 922 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 OR52L2PQ8NGH6 319 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 MRPL30Q8TCC3 161 aaKnown RBP9.81□□□□□ -0.84
PDPN-208ENST00000509009 TFAP2CQ92754 450 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 RAX2Q96IS3 184 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 MCRIP2Q9BUT9 160 aaKnown RBP9.81□□□□□ -0.84
PDPN-208ENST00000509009 GON7Q9BXV9 100 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 KCNIP1Q9NZI2 227 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 GHRLQ9UBU3 117 aa9.81□□□□□ -0.84
PDPN-208ENST00000509009 H0YHG0 523 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 CASQ2O14958 399 aaPredicted RBP9.8□□□□□ -0.84
PDPN-208ENST00000509009 ELANEP08246 267 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 CD37P11049 281 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
PDPN-208ENST00000509009 CFHR3Q02985 330 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 FOXE3Q13461 319 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 KIR2DS1Q14954 304 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 RNLSQ5VYX0 342 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 ZNF554Q86TJ5 538 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 MS4A15Q8N5U1 240 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 NKAIN3Q8N8D7 197 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 THRSPQ92748 146 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 FAM46BQ96A09 425 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 RITA1Q96K30 269 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 HSPB9Q9BQS6 159 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 ERGIC3Q9Y282 383 aa9.8□□□□□ -0.84
PDPN-208ENST00000509009 IGHG4P01861 327 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 IGF1P05019 195 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 CDK1P06493 297 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 MAPK3P27361 379 aaPredicted RBP9.79□□□□□ -0.84
PDPN-208ENST00000509009 CHATP28329 748 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 SOX6P35712 828 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 PPP1CCP36873 323 aaKnown RBP9.79□□□□□ -0.84
PDPN-208ENST00000509009 HTD2P86397 168 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 LSAMPQ13449 338 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 GNMTQ14749 295 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
PDPN-208ENST00000509009 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 VAX1Q5SQQ9 334 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 C1orf100Q5SVJ3 147 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 C6orf141Q5SZD1 244 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 FAM27D1Q5T7N8 215 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 OR10K2Q6IF99 312 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 ODF3L1Q8IXM7 274 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 DPF1Q92782 380 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 SULT4A1Q9BR01 284 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 FAAP24Q9BTP7 215 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 CST11Q9H112 138 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 LRRC42Q9Y546 428 aa9.79□□□□□ -0.84
PDPN-208ENST00000509009 PTGES3LE9PB15 166 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 YPEL1O60688 119 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 UBBP0CG47 229 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 HTR2CP28335 458 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 GABPB1Q06547 395 aaPredicted RBP9.78□□□□□ -0.84
PDPN-208ENST00000509009 DEFB136Q30KP8 78 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 NKAPLQ5M9Q1 402 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 PHYHIPQ92561 330 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 GALMQ96C23 342 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 KCTD7Q96MP8 289 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 NEDD4LQ96PU5 975 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 YPEL2Q96QA6 119 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 ABHD14AQ9BUJ0 271 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 ZNF580Q9UK33 172 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms