RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 DEFA6Q01524 100 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 BSPH1Q075Z2 132 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 PDK2Q15119 407 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 TIMM23BQ5SRD1 257 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 CLEC6AQ6EIG7 209 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 XKRXQ6PP77 449 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZFAND2AQ8N6M9 145 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 GPR119Q8TDV5 335 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 SMIM12Q96EX1 92 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 TRNT1Q96Q11 434 aaKnown RBP1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 STACQ99469 402 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 TUBA4BQ9H853 241 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 TAS2R9Q9NYW1 312 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 MMACHCQ9Y4U1 282 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 CRB1P82279 1406 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 DHX57Q6P158 1386 aaKnown RBP1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 CLUHO75153 1309 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 TMEM213A2RRL7 107 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 TOX3O15405 576 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 ASS1P00966 412 aaKnown RBP1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR4A8P0C604 315 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 GZMHP20718 246 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 F8A1P23610 371 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 AKR1C2P52895 323 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 TRMT12Q53H54 448 aaKnown RBP1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 DOLPP1Q86YN1 238 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 DNAAF3Q8N9W5 541 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR5C1Q8NGR4 320 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR4K13Q8NH42 304 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 SUN5Q8TC36 379 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 MED18Q9BUE0 208 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 NRBP2Q9NSY0 501 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 FIS1Q9Y3D6 152 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 HSPE1-MOB4S4R3N1 261 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 AK9Q5TCS8 1911 aa1.77□□□□□ -2.13
HMGB1P28-201ENST00000507778 LOC102725191A0A1B0GVB3 256 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 C17orf98A8MV24 154 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 CRYGDP07320 174 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 PET100P0DJ07 73 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 ORM2P19652 201 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 ADORA1P30542 326 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 PSMB3P49720 205 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 C1DQ13901 141 aaKnown RBP1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 PDGFRLQ15198 375 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 CLEC12BQ2HXU8 276 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 FAM45BPQ6NSW5 357 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 SDIM1Q6ZPB5 146 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 YIPF7Q8N8F6 280 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 TMEM208Q9BTX3 173 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 METTL9Q9H1A3 318 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 UBQLN4Q9NRR5 601 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 GLS2Q9UI32 602 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 LINC00527Q9UJ94 153 aa1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 DNMT1P26358 1616 aaKnown RBP1.76□□□□□ -2.13
HMGB1P28-201ENST00000507778 ORM1P02763 201 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 NQO1P15559 274 aaKnown RBP1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 AGTR1P30556 359 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 PPP1CCP36873 323 aaKnown RBP1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 CD151P48509 253 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 SLC35A2P78381 396 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 ZNF181Q2M3W8 571 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 ACSBG2Q5FVE4 666 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 SCGB1D4Q6XE38 83 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 BLIDQ8IZY5 108 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 ZNF567Q8N184 647 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 NATD1Q8N6N6 113 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 TMEM75Q8N9X5 138 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 LFNGQ8NES3 379 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR7G1Q8NGA0 311 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR52E4Q8NGH9 312 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 OR51H1Q8NH63 302 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 STOML3Q8TAV4 291 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 TNFAIP8L1Q8WVP5 186 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 CAPZA3Q96KX2 299 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 ZNF337Q9Y3M9 751 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 SNX10Q9Y5X0 201 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 ZNF407Q9C0G0 2248 aa1.75□□□□□ -2.13
HMGB1P28-201ENST00000507778 TMEM94Q12767 1356 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 PTPRJQ12913 1337 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 DAPL1A0PJW8 107 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 LINC00862A6NCI5 91 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 DEDDO75618 318 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 ARL6IP5O75915 188 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 ATP6V1G2O95670 118 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 CSRP1P21291 193 aaKnown RBP1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 CFL1P23528 166 aaKnown RBP1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 ACTBP60709 375 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 ACTG1P63261 375 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 HTR4Q13639 388 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 MRPL51Q4U2R6 128 aaKnown RBP1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 RBP7Q96R05 134 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 GPR22Q99680 433 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 AICDAQ9GZX7 198 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 MED28Q9H204 178 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 DNAJC12Q9UKB3 198 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 MRPS16Q9Y3D3 137 aaKnown RBP1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 HEY1Q9Y5J3 304 aa1.74□□□□□ -2.13
HMGB1P28-201ENST00000507778 COL18A1P39060 1754 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms