RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MRPL30Q8TCC3 161 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 RTN4IP1Q8WWV3 396 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM46BQ96A09 425 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TMED9Q9BVK6 235 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 CST11Q9H112 138 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 RAB9BQ9NP90 201 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 ISYNA1Q9NPH2 558 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TRAPPC2LQ9UL33 140 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TPRKBQ9Y3C4 175 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 UBE2QL1A1L167 161 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM14DPA8MWL7 114 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 SLC22A1O15245 554 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 MPIG6BO95866 241 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 IGHG2P01859 326 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 SRMP19623 302 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 CRHBPP24387 322 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 IL3RAP26951 378 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 REG1BP48304 166 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 RPS27AP62979 156 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 UNC119Q13432 240 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 HES1Q14469 280 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 MED22Q15528 200 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 HSD17B12Q53GQ0 312 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 CT45A1Q5HYN5 189 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 RBM48Q5RL73 367 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 LIPKQ5VXJ0 399 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 STEAP3Q658P3 488 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 OR10K2Q6IF99 312 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 PRSS48Q7RTY5 328 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 CEACAM19Q7Z692 300 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 OR4X2Q8NGF9 303 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 CT45A3Q8NHU0 189 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 UFD1Q92890 307 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 GFI1Q99684 422 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 SULT4A1Q9BR01 284 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 TM2D1Q9BX74 207 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 PLSCR3Q9NRY6 295 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 GNG12Q9UBI6 72 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 TSSC4Q9Y5U2 329 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
PDLIM5-209ENST00000506632 IGHV3-72A0A0B4J1Y9 119 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 A0A1W2PRX2 142 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TCRBV4S1A1TA0A5B7 111 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TXNL1O43396 289 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 RGS10O43665 173 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 NAPSAO96009 420 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 CPEP16870 476 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 HTR2CP28335 458 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 CD1BP29016 333 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 RPS25P62851 125 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 HTD2P86397 168 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TNP2Q05952 138 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 MLLT11Q13015 90 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 HNF4GQ14541 408 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 GNMTQ14749 295 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 MORN2Q502X0 79 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 C9orf152Q5JTZ5 239 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 LY6G6FQ5SQ64 297 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 Q6ZPA2 131 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 C6orf201Q7Z4U5 140 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 C5orf24Q7Z6I8 188 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 MOB3BQ86TA1 216 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TGIF2LXQ8IUE1 241 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 ODF3L1Q8IXM7 274 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 Q8N9W7 124 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 OR10V1Q8NGI7 309 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 OR6M1Q8NGM8 313 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 OR2T10Q8NGZ9 312 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 KCNG3Q8TAE7 436 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 CHPT1Q8WUD6 406 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 CHAC2Q8WUX2 184 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 NOL4LQ96MY1 436 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 NICN1Q9BSH3 213 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM59Q9BXS4 323 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 KCNK15Q9H427 330 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 TAF9BQ9HBM6 251 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 JPT1Q9UK76 154 aa7.17□□□□□ -1.26
PDLIM5-209ENST00000506632 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 PSMB11A5LHX3 300 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 FOXI3A8MTJ6 420 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF736B4DX44 427 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 SLC17A2O00624 439 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 LANCL1O43813 399 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 MOSP00540 346 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 PSMA1P25786 263 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 TRAM1Q15629 374 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 HMGN3Q15651 99 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 TBCEQ15813 527 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 NKAPLQ5M9Q1 402 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF880Q6PDB4 577 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 PRR18Q8N4B5 295 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM89BQ8N5H3 189 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM71E2Q8N5Q1 922 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 OR8H1Q8NGG4 311 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 OR52L2PQ8NGH6 319 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM203Q969S6 136 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 PHF21AQ96BD5 680 aa7.16□□□□□ -1.26
PDLIM5-209ENST00000506632 NEDD4LQ96PU5 975 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms