RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 PEX16Q9Y5Y5 336 aa17.51■□□□□ 0.39
LSM6-203ENST00000503982 IGHV1-3A0A0C4DH29 117 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 SPINT2O43291 252 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 ORC5O43913 435 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 MT-ND4P03905 459 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 ZNF497Q6ZNH5 498 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 C5orf56Q8N8D9 126 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 OR52M1Q8NGK5 317 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 GNG12Q9UBI6 72 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 LINC00527Q9UJ94 153 aa17.5■□□□□ 0.39
LSM6-203ENST00000503982 TRAV1-2A0A0B4J238 106 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 C15orf65H3BRN8 121 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 FGF16O43320 207 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 SLC35B1P78383 322 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 ZNF816Q0VGE8 651 aaPredicted RBP17.49■□□□□ 0.39
LSM6-203ENST00000503982 C6orf183Q5T699 404 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 SLC35E3Q7Z769 313 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 OR10V1Q8NGI7 309 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 CHPT1Q8WUD6 406 aa17.49■□□□□ 0.39
LSM6-203ENST00000503982 MRPS24Q96EL2 167 aaKnown RBP17.49■□□□□ 0.39
LSM6-203ENST00000503982 NOL4LQ96MY1 436 aaPredicted RBP17.49■□□□□ 0.39
LSM6-203ENST00000503982 UBE2QL1A1L167 161 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 NUDT19A8MXV4 375 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 SMIM18P0DKX4 95 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 MGMTP16455 207 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 C1orf100Q5SVJ3 147 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 FOXB2Q5VYV0 432 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 FAM53AQ6NSI3 398 aaPredicted RBP17.48■□□□□ 0.39
LSM6-203ENST00000503982 FOXRED2Q8IWF2 684 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 OR51D1Q8NGF3 324 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 OR2T10Q8NGZ9 312 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 AURKAIP1Q9NWT8 199 aaPredicted RBP17.48■□□□□ 0.39
LSM6-203ENST00000503982 GHRLQ9UBU3 117 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 STUB1Q9UNE7 303 aa17.48■□□□□ 0.39
LSM6-203ENST00000503982 NEDD8Q15843 81 aa17.47■□□□□ 0.39
LSM6-203ENST00000503982 Q6ZPA2 131 aa17.47■□□□□ 0.39
LSM6-203ENST00000503982 LINC00311Q8N616 119 aa17.47■□□□□ 0.39
LSM6-203ENST00000503982 FAM46BQ96A09 425 aa17.47■□□□□ 0.39
LSM6-203ENST00000503982 KCNIP1Q9NZI2 227 aa17.47■□□□□ 0.39
LSM6-203ENST00000503982 C12orf77C9JDV5 145 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 RANBP1P43487 201 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 LOXL3P58215 753 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 NKAPLQ5M9Q1 402 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 GLT8D1Q68CQ7 371 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 TRAT1Q6PIZ9 186 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 TGIF2LXQ8IUE1 241 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 OR1L1Q8NH94 360 aa17.46■□□□□ 0.39
LSM6-203ENST00000503982 EAF1Q96JC9 268 aaPredicted RBP17.46■□□□□ 0.39
LSM6-203ENST00000503982 RCC2Q9P258 522 aaKnown RBP17.46■□□□□ 0.39
LSM6-203ENST00000503982 SLC31A2O15432 143 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 MPIG6BO95866 241 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 HBZP02008 142 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 UBBP0CG47 229 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 FUT3P21217 361 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 CALRP27797 417 aaKnown RBP17.45■□□□□ 0.38
LSM6-203ENST00000503982 PSMD7P51665 324 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 TMEM104Q8NE00 496 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 WFDC9Q8NEX5 89 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 RTN4IP1Q8WWV3 396 aaPredicted RBP17.45■□□□□ 0.38
LSM6-203ENST00000503982 RASL11BQ9BPW5 248 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 CST11Q9H112 138 aa17.45■□□□□ 0.38
LSM6-203ENST00000503982 FAM90A10PA6NDY2 464 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 FAM90A7PA6NKC0 464 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 FAM90A23PA8MXZ1 464 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 SLC22A1O15245 554 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 TMEM30BQ3MIR4 351 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 IZUMO1Q8IYV9 350 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 KLHL30-AS1Q8NEE0 82 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 RCC1LQ96I51 464 aaKnown RBP17.44■□□□□ 0.38
LSM6-203ENST00000503982 GFI1Q99684 422 aa17.44■□□□□ 0.38
LSM6-203ENST00000503982 TXNL4BQ9NX01 149 aaKnown RBP17.44■□□□□ 0.38
LSM6-203ENST00000503982 TXNL1O43396 289 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 MOSP00540 346 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 CD36P16671 472 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 RCC1P18754 421 aaPredicted RBP17.43■□□□□ 0.38
LSM6-203ENST00000503982 CD1BP29016 333 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 RPL23AP62750 156 aaKnown RBP17.43■□□□□ 0.38
LSM6-203ENST00000503982 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 STPG2Q8N412 459 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 C8orf31Q8N9H6 132 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 OR6M1Q8NGM8 313 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 DPF1Q92782 380 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 YIPF6Q96EC8 236 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 Q96M66 194 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 NEDD4LQ96PU5 975 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 MRPS26Q9BYN8 205 aaKnown RBP17.43■□□□□ 0.38
LSM6-203ENST00000503982 TAF9BQ9HBM6 251 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 OR2S2Q9NQN1 319 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 SSR3Q9UNL2 185 aa17.43■□□□□ 0.38
LSM6-203ENST00000503982 SLC17A2O00624 439 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 PDCD6O75340 191 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 CA11O75493 328 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 DUS4LO95620 317 aaKnown RBP17.42■□□□□ 0.38
LSM6-203ENST00000503982 IGHG2P01859 326 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 Q3ZCU0 254 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 SLC25A48Q6ZT89 311 aaKnown RBP17.42■□□□□ 0.38
LSM6-203ENST00000503982 C8orf86Q6ZUL3 223 aa17.42■□□□□ 0.38
LSM6-203ENST00000503982 LIN7CQ9NUP9 197 aaKnown RBP17.42■□□□□ 0.38
LSM6-203ENST00000503982 SHISA3A0PJX4 238 aa17.41■□□□□ 0.38
LSM6-203ENST00000503982 AP4M1O00189 453 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms