RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RAB9AP51151 201 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 DEFB136Q30KP8 78 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF260Q3ZCT1 412 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 Q499Y3 187 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 SYT6Q5T7P8 510 aaPredicted RBP4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF660Q6AZW8 331 aaPredicted RBP4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 DMKNQ6E0U4 476 aaPredicted RBP4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 TMEM65Q6PI78 240 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 CD200R1LQ6Q8B3 271 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 TMPRSS11AQ6ZMR5 421 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF833PQ6ZTB9 187 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 SATL1Q86VE3 508 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ODF3L1Q8IXM7 274 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 NKAIN3Q8N8D7 197 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 OR6Q1Q8NGQ2 317 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 OR1N2Q8NGR9 330 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 APH1BQ8WW43 257 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 PRR25Q96S07 402 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 UQCC2Q9BRT2 126 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 C9orf16Q9BUW7 83 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 FAM192AQ9GZU8 254 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 BABAM2Q9NXR7 383 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ING3Q9NXR8 418 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 TAS2R4Q9NYW5 299 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 CKLFQ9UBR5 152 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 DIMT1Q9UNQ2 313 aaKnown RBP4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 DYNC2H1Q8NCM8 4307 aaKnown RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 STAB2Q8WWQ8 2551 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 IGHV7-81A0A0B4J1V7 117 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 IGHV3-72A0A0B4J1Y9 119 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TRAV41A0A0B4J266 112 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OR5H14A6NHG9 310 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 SAC3D1A6NKF1 404 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF736B4DX44 427 aaPredicted RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 DYNC1I1O14576 645 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OVOL1O14753 267 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 NBR2O15453 112 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 CIB2O75838 187 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 RBBP9O75884 186 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 HBZP02008 142 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OR8U9P0C7N5 309 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 CD37P11049 281 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 SERPINA2P20848 420 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 FUT3P21217 361 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 MC5RP33032 325 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 CAPGP40121 348 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 REG1BP48304 166 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 GTF2A1P52655 376 aaPredicted RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TAS2R43P59537 309 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ACTBP60709 375 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 RPS11P62280 158 aaKnown RBP eCLIP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TMEM267Q0VDI3 215 aaPredicted RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 MMDQ15546 238 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 LTC4SQ16873 150 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 C5orf64Q2M2E5 130 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 MOGAT2Q3SYC2 334 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 AKIRIN2Q53H80 203 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ATAD3CQ5T2N8 411 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 RAB12Q6IQ22 244 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 LIN54Q6MZP7 749 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 CBR4Q8N4T8 237 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF485Q8NCK3 441 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OR10K1Q8NGX5 313 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 FLYWCH2Q96CP2 140 aaKnown RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 PGLYRP3Q96LB9 341 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 Q96M66 194 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 DUX3Q96PT4 197 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OR14A2Q96R54 314 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 CITED4Q96RK1 184 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF184Q99676 751 aaPredicted RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 NABP2Q9BQ15 211 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ABHD14AQ9BUJ0 271 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TOLLIPQ9H0E2 274 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 SLA2Q9H6Q3 261 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ZMAT4Q9H898 229 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 OR2S2Q9NQN1 319 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 C8orf4Q9NR00 106 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ETAA1Q9NY74 926 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 PIPOXQ9P0Z9 390 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 GNG12Q9UBI6 72 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 TRAPPC2LQ9UL33 140 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 RNF150Q9ULK6 438 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 ING4Q9UNL4 249 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 EXOSC1Q9Y3B2 195 aaKnown RBP4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 NUBP2Q9Y5Y2 271 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 DNAH7Q8WXX0 4024 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 SACSQ9NZJ4 4579 aa4.73□□□□□ -1.65
LSM3P4-201ENST00000502948 RYR2Q92736 4967 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 TRBV5-7A0A0A0MS05 114 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 TRBV6-6A0A0A6YYG2 114 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 TRAV39A0A0B4J263 110 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MAGEA13PA6NCF6 341 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 LINC01619G3V211 115 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 H3BUA1 57 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ATP6V0E1O15342 81 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SLC31A2O15432 143 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms