RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 C22orf15Q8WYQ4 148 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 MAFIPQ8WZ33 124 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 HYLS1Q96M11 299 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 STACQ99469 402 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 PFDN5Q99471 154 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 VAT1Q99536 393 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 PDCD1LG2Q9BQ51 273 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CCDC32Q9BV29 185 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 SLC17A9Q9BYT1 436 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 MFSD1Q9H3U5 465 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM9BQ9NQ34 198 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 AIG1Q9NVV5 245 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CALYQ9NYX4 217 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 POMPQ9Y244 141 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TRAPPC4Q9Y296 219 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 NEUROG3Q9Y4Z2 214 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 U3KQ87 197 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 V9GY05 133 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 PARP14Q460N5 1801 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 A0A0C4DFX4 3053 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 MYH10P35580 1976 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PLIN4Q96Q06 1357 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PLXNA1Q9UIW2 1896 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 IGHV2OR16-5A0A0B4J2B6 119 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 G3V2T6 193 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 M0R1B8 84 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CHP2O43745 196 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PIAS1O75925 651 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 GABARAPO95166 117 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CTDNEP1O95476 244 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 TCRBP04435 133 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 HLA-EP13747 358 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CELP19835 753 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 HTR1DP28221 377 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 IDH2P48735 452 aaKnown RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 RBP2P50120 134 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 RAB8AP61006 207 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 NUTF2P61970 127 aaKnown RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 GTF2BQ00403 316 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 MXD1Q05195 221 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 TRAM1Q15629 374 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 GUCA2BQ16661 112 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ACSM3Q53FZ2 586 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CNIH2Q6PI25 160 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 SMIM15Q7Z3B0 74 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PHF13Q86YI8 300 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 WDFY1Q8IWB7 410 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 C12orf45Q8N5I9 185 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 SPICQ8N5J4 248 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ACBD4Q8NC06 268 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CCDC54Q8NEL0 328 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 OR5B17Q8NGF7 314 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 OR52E2Q8NGJ4 325 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PIFOQ8TCI5 191 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ZFP90Q8TF47 636 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 APH1BQ8WW43 257 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 HIST1H4GQ99525 98 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 GPR22Q99680 433 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 RIOK2Q9BVS4 552 aaKnown RBP3.29□□□□□ -1.88
SF3B1-212ENST00000496458 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ARL6Q9H0F7 186 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF442Q9H7R0 627 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 SLCO1B3Q9NPD5 702 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 XPNPEP1Q9NQW7 623 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 FAM49BQ9NUQ9 324 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 SCP2D1Q9UJQ7 156 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 ALG5Q9Y673 324 aa3.29□□□□□ -1.88
SF3B1-212ENST00000496458 PLXNB2O15031 1838 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 MYO10Q9HD67 2058 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 NKX2-6A6NCS4 301 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 C21orf140B9A014 251 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 MED6O75586 246 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 SRP72O76094 671 aaKnown RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 AIFM1O95831 613 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 GUSBP08236 651 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 PGA4P0DJD7 388 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 PGA3P0DJD8 388 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 PGA5P0DJD9 388 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 IFI30P13284 250 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 SPNP16150 400 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 PVALBP20472 110 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 G0S2P27469 103 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 CA5AP35218 305 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 RPA3P35244 121 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 GLP1RP43220 463 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 GALR1P47211 349 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 SRP9P49458 86 aaKnown RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 ACOT2P49753 483 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 IDH3GP51553 393 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-212ENST00000496458 DLX1P56177 255 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 CLDN12P56749 244 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 GABARAPL2P60520 117 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 HERVK_113P61574 105 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 PPP1CBP62140 327 aa3.28□□□□□ -1.88
SF3B1-212ENST00000496458 SLC7A9P82251 487 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms