RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 AKR1E2Q96JD6 320 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 PECRQ9BY49 303 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 GNG12Q9UBI6 72 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 MGAT4AQ9UM21 535 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 TCF19Q9Y242 345 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
SF3A1-209ENST00000496189 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
SF3A1-209ENST00000496189 CD3GP09693 182 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 RORCP51449 518 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 TMBIM6P55061 237 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 TMEM50BP56557 158 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 PLA2G7Q13093 441 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 TPTE2P1Q5T6R2 138 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 BAIAP2L2Q6UXY1 529 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 MOB1BQ7L9L4 216 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 DYNAPQ8N1N2 210 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 MRPL30Q8TCC3 161 aaKnown RBP13.22□□□□□ -0.29
SF3A1-209ENST00000496189 NAA50Q9GZZ1 169 aaKnown RBP13.22□□□□□ -0.29
SF3A1-209ENST00000496189 RANBP3Q9H6Z4 567 aaPredicted RBP13.22□□□□□ -0.29
SF3A1-209ENST00000496189 C12orf4Q9NQ89 552 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
SF3A1-209ENST00000496189 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 RAB27BO00194 218 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 TSPAN9O75954 239 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 IGHV3-7P01780 117 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 RAB13P51153 203 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 RELBQ01201 579 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 Q3ZCU0 254 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 C11orf88Q6PI97 169 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 Q6ZSV7 163 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 OR2T6Q8NHC8 308 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 SETD6Q8TBK2 473 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 ACOT12Q8WYK0 555 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 AP3S1Q92572 193 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.29
SF3A1-209ENST00000496189 LEAP2Q969E1 77 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 CMSS1Q9BQ75 279 aaKnown RBP13.21□□□□□ -0.29
SF3A1-209ENST00000496189 DCSTAMPQ9H295 470 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 C16orf95Q9H693 158 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 DIABLOQ9NR28 239 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
SF3A1-209ENST00000496189 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
SF3A1-209ENST00000496189 ANK2Q01484 3957 aa13.21□□□□□ -0.3
SF3A1-209ENST00000496189 A0A075B6Q4 140 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 A0A0A6YYH2 397 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 A6NJ64 397 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 C12orf77C9JDV5 145 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 RGS11O94810 467 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 NAPSAO96009 420 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 HBZP02008 142 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 HIST1H1DP16402 221 aaKnown RBP13.2□□□□□ -0.3
SF3A1-209ENST00000496189 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
SF3A1-209ENST00000496189 RAB7AP51149 207 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 ARFRP1Q13795 201 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 PLAC9Q5JTB6 97 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 LINC01006Q8NI28 216 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 GFOD1Q9NXC2 390 aa13.2□□□□□ -0.3
SF3A1-209ENST00000496189 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 IGHV3-43A0A0B4J1X8 118 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 C15orf65H3BRN8 121 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 PEX14O75381 377 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 IGHV3-43DP0DP04 118 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 GNB3P16520 340 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 SOX6P35712 828 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 TALDO1P37837 337 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 C16orf82Q7Z2V1 217 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 C8orf31Q8N9H6 132 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 OR5H6Q8NGV6 325 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 GALMQ96C23 342 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 S100A16Q96FQ6 103 aaKnown RBP13.19□□□□□ -0.3
SF3A1-209ENST00000496189 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 OR2S2Q9NQN1 319 aa13.19□□□□□ -0.3
SF3A1-209ENST00000496189 A6NDX4 124 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 MFNGO00587 321 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
SF3A1-209ENST00000496189 GSTP1P09211 210 aaKnown RBP13.18□□□□□ -0.3
SF3A1-209ENST00000496189 PITPNAQ00169 270 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 CDNFQ49AH0 187 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 UBE2NLQ5JXB2 153 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
SF3A1-209ENST00000496189 JPT1Q9UK76 154 aa13.18□□□□□ -0.3
SF3A1-209ENST00000496189 A0A1W2PPE3 182 aa13.17□□□□□ -0.3
SF3A1-209ENST00000496189 HSD17B6O14756 317 aa13.17□□□□□ -0.3
SF3A1-209ENST00000496189 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms