RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, human

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-221	ENST00000495755	GLT8D1	Q68CQ7	371 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	OR10K2	Q6IF99	312 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	REC114	Q7Z4M0	266 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	C5orf24	Q7Z6I8	188 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF329	Q86UD4	541 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	TGIF2LX	Q8IUE1	241 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	OR4X2	Q8NGF9	303 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	OR10V1	Q8NGI7	309 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	OR2T10	Q8NGZ9	312 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	MRPL30	Q8TCC3	161 aa	Known RBP	5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	FAM46B	Q96A09	425 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	NOL4L	Q96MY1	436 aa	Predicted RBP	5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	ANKRD60	Q9BZ19	345 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	CST11	Q9H112	138 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	TAF9B	Q9HBM6	251 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	NECAP2	Q9NVZ3	263 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	GNG12	Q9UBI6	72 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	TPRKB	Q9Y3C4	175 aa		5.7	□□□□□ -1.5
VPS52-221	ENST00000495755	SERPINE3	A8MV23	424 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	TMEM14DP	A8MWL7	114 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	TXNL1	O43396	289 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	RGS10	O43665	173 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	LANCL1	O43813	399 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	MOS	P00540	346 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	PF4V1	P10720	104 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	IGLL1	P15814	213 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	CD33	P20138	364 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	HTR2C	P28335	458 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	GPR12	P47775	334 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	HTD2	P86397	168 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	UNC119	Q13432	240 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	GNMT	Q14749	295 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	MED22	Q15528	200 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	MORN2	Q502X0	79 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	RBM48	Q5RL73	367 aa	Known RBP	5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	LIPK	Q5VXJ0	399 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	TMEM91	Q6ZNR0	172 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755		Q6ZPA2	131 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	SLC35E3	Q7Z769	313 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	PRR18	Q8N4B5	295 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755		Q8N9W7	124 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	OR8H1	Q8NGG4	311 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	OR52L2P	Q8NGH6	319 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	KCNG3	Q8TAE7	436 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	CHPT1	Q8WUD6	406 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	UFD1	Q92890	307 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	TMEM203	Q969S6	136 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	PHF21A	Q96BD5	680 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	RBMXL1	Q96E39	390 aa	Known RBP	5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	S1PR3	Q99500	378 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	GFI1	Q99684	422 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	SULT4A1	Q9BR01	284 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	FAAP24	Q9BTP7	215 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	TM2D1	Q9BX74	207 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	ABCG5	Q9H222	651 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	ISYNA1	Q9NPH2	558 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	OR2S2	Q9NQN1	319 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	LIN7C	Q9NUP9	197 aa	Known RBP	5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	KCNIP1	Q9NZI2	227 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	LINC00527	Q9UJ94	153 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755	LRRC42	Q9Y546	428 aa		5.69	□□□□□ -1.5
VPS52-221	ENST00000495755		A0A0A6YYD4	124 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	NCBP2L	A6PVI3	153 aa	Known RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	YPEL1	O60688	119 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	BPNT1	O95861	308 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	NAPSA	O96009	420 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	CPE	P16870	476 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	CRHBP	P24387	322 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	PPP1CC	P36873	323 aa	Known RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	F2RL1	P55085	397 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	RPL23A	P62750	156 aa	Known RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	RPS25	P62851	125 aa	Known RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	SLC35B1	P78383	322 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	MLLT11	Q13015	90 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	LSAMP	Q13449	338 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	TRAM1	Q15629	374 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	HMGN3	Q15651	99 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	NKAPL	Q5M9Q1	402 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	FOXB2	Q5VYV0	432 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF880	Q6PDB4	577 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	ETV3L	Q6ZN32	361 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	PRSS48	Q7RTY5	328 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	OR2W3	Q7Z3T1	314 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	C6orf201	Q7Z4U5	140 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	FOXRED2	Q8IWF2	684 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	ODF3L1	Q8IXM7	274 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	STPG2	Q8N412	459 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	FAM89B	Q8N5H3	189 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	FAM71E2	Q8N5Q1	922 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	COMMD1	Q8N668	190 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	LINC00482	Q8N8I6	264 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	OR6M1	Q8NGM8	313 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	NEDD4L	Q96PU5	975 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	YPEL2	Q96QA6	119 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	NICN1	Q9BSH3	213 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	TMEM59	Q9BXS4	323 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	LPAR5	Q9H1C0	372 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	KCNK15	Q9H427	330 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	ZFP57	Q9NU63	452 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms