RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 GPR173Q9NS66 373 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 TMEM100Q9NV29 134 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CTSZQ9UBR2 303 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 ZNF391Q9UJN7 358 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 POMT1Q9Y6A1 747 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 TRAV8-7A0A075B6U6 113 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 A0A0B4J293 547 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 A0A0U1RQK1 487 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 hCG_38984A0A1B0GV85 526 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 FAM230AA0A1W2PPH8 454 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 SMIM30A4D0T7 59 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 LRRC30A6NM36 301 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 ANKRD30BLA7E2S9 258 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 IQCF6A8MYZ5 107 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 G3V4G9 280 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 ENSAO43768 121 aaKnown RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 CDRT1O95170 752 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 NRASP01111 189 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 MAS1P04201 325 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 CD2P06729 351 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 UCHL1P09936 223 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 OCMP0CE72 109 aaPredicted RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 ATF1P18846 271 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 CCL1P22362 96 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 CALRP27797 417 aaKnown RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 FGF9P31371 208 aaPredicted RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 DDOSTP39656 456 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 IER3P46695 156 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 TMBIM6P55061 237 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 NCS1P62166 190 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 MXD1Q05195 221 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 PRDX4Q13162 271 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 MPPED2Q15777 294 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 UBE2V2Q15819 145 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 TIMM50Q3ZCQ8 353 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 HSD17B12Q53GQ0 312 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 CLVS2Q5SYC1 327 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 PRAMEF6Q5VXH4 476 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 CD200R1LQ6Q8B3 271 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 GDPGP1Q6ZNW5 385 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 Q6ZSR3 168 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 Q6ZTC4 211 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 ZNF329Q86UD4 541 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 ZSCAN4Q8NAM6 433 aaPredicted RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 OR1M1Q8NGA1 313 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 SSMEM1Q8WWF3 244 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 PHYHIPQ92561 330 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 LHX4Q969G2 390 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 DGCR14Q96DF8 476 aaKnown RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 RNF170Q96K19 258 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 KCTD7Q96MP8 289 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 C17orf77Q96MU5 243 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 TECTBQ96PL2 329 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 KCNK15Q9H427 330 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 PLEKHA1Q9HB21 404 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 BATF3Q9NR55 127 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 TAS2R4Q9NYW5 299 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 MRPL15Q9P015 296 aaKnown RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 NDUFA13Q9P0J0 144 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 ENPP5Q9UJA9 477 aa5.18□□□□□ -1.58
VIM-207ENST00000495528 AK6Q9Y3D8 172 aaKnown RBP5.18□□□□□ -1.58
VIM-207ENST00000495528 TRAV1-2A0A0B4J238 106 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 IGHV1-69DA0A0B4J2H0 117 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 TEX13DA0A0J9YY54 714 aaPredicted RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 ZNF816-ZNF321PA0A0X1KG74 233 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 A0A1B0GWJ7 208 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 A0A1W2PPI3 338 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 NOL3O60936 208 aaKnown RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 FCN3O75636 299 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 SC5DO75845 299 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 ARL6IP5O75915 188 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 CST4P01036 141 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 IGHV1-69P01742 117 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 PRB2P02812 416 aaPredicted RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 PRSS1P07477 247 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 VPREB1P12018 145 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 IRF2P14316 349 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 RAB3AP20336 220 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 GALP22466 123 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 MYL9P24844 172 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 MAPK3P27361 379 aaPredicted RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 SDC2P34741 201 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 SERPINB10P48595 397 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 NPY4RP50391 375 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 CAV3P56539 151 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 ARF6P62330 175 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 GAGE2BQ13066 116 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 SPCS2Q15005 226 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OR8G1Q15617 311 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OR8B8Q15620 311 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 GAGE2EQ4V326 116 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 PLCXD3Q63HM9 321 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 GAGE2AQ6NT46 116 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 PDZD9Q8IXQ8 264 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OR51A2Q8NGJ7 313 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OR13C9Q8NGT0 318 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OR11L1Q8NGX0 322 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 TRMT10AQ8TBZ6 339 aaKnown RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 NPRL2Q8WTW4 380 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 C12orf43Q96C57 262 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms