RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	ZNF124	Q15973	351 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	ODF3L1	Q8IXM7	274 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	LFNG	Q8NES3	379 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	KLF14	Q8TD94	323 aa	Predicted RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	PBDC1	Q9BVG4	233 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	EIF5A2	Q9GZV4	153 aa	Known RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	MBNL3	Q9NUK0	354 aa	Known RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	MLX	Q9UH92	298 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	WIPI2	Q9Y4P8	454 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522		A0A0G2JRQ6	117 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522		H0YL77	283 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	IGLV2-14	P01704	120 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	ACAA1	P09110	424 aa	Predicted RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	COX5A	P20674	150 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	MPV17	P39210	176 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	KIR2DL2	P43627	348 aa	Predicted RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	ARL6IP6	Q8N6S5	226 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	RNASE11	Q8TAA1	199 aa	Known RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	OBP2B	Q9NPH6	170 aa		12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	RBM7	Q9Y580	266 aa	Known RBP	12.97	□□□□□ -0.33
CALD1-222	ENST00000495522	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	IGHV3-64D	A0A0J9YX35	117 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	HAND1	O96004	215 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	IGKV3-15	P01624	115 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	PAX9	P55771	341 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	STX12	Q86Y82	276 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	C9orf106	Q8NAJ2	232 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	SNIP1	Q8TAD8	396 aa	Known RBP	12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	LSM10	Q969L4	123 aa	Known RBP	12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	SARAF	Q96BY9	339 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	BCL2L14	Q9BZR8	327 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	HES4	Q9HCC6	221 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	PARD6A	Q9NPB6	346 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	KCNS2	Q9ULS6	477 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	PPP1R3C	Q9UQK1	317 aa		12.96	□□□□□ -0.33
CALD1-222	ENST00000495522	REL	Q04864	619 aa	Predicted RBP	12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	VWA1	Q6PCB0	445 aa		12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	TMEM217	Q8N7C4	229 aa		12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	WDR31	Q8NA23	367 aa		12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	RAB40C	Q96S21	281 aa		12.96	□□□□□ -0.34
CALD1-222	ENST00000495522	LIN7C	Q9NUP9	197 aa	Known RBP	12.96	□□□□□ -0.34
CALD1-222	ENST00000495522		A0A1B0GW64	132 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	WISP2	O76076	250 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	AGFG2	O95081	481 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	S100A8	P05109	93 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	WT1	P19544	449 aa	Predicted RBP	12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	RPL23A	P62750	156 aa	Known RBP	12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	OR8G5	Q8NG78	346 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	ATP5S	Q99766	215 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	GSN-AS1	Q9NRJ2	163 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	OR14J1	Q9UGF5	321 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	FRY	Q5TBA9	3013 aa		12.95	□□□□□ -0.34
CALD1-222	ENST00000495522	MED19	A0JLT2	244 aa	Predicted RBP	12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	MLNR	O43193	412 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	IGKV1-39	P01597	117 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	IGKV1D-39	P04432	117 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	PPP1CC	P36873	323 aa	Known RBP	12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	CEACAM6	P40199	344 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	CD200	P41217	278 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	UBALD1	Q8TB05	177 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	SMCO4	Q9NRQ5	59 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	KCNIP1	Q9NZI2	227 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	TMEM30CP	A0ZSE6	113 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	TUBG1	P23258	451 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	KDF1	Q8NAX2	398 aa	Predicted RBP	12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	CXXC4	Q9H2H0	198 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	TUBG2	Q9NRH3	451 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	CACNG5	Q9UF02	275 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	RFNG	Q9Y644	331 aa		12.94	□□□□□ -0.34
CALD1-222	ENST00000495522	OTOGL	Q3ZCN5	2332 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	TXNL1	O43396	289 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	WDR1	O75083	606 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	DFFB	O76075	338 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	CEACAM1	P13688	526 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	SELL	P14151	372 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	S100P	P25815	95 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	CEBPD	P49716	269 aa	Predicted RBP	12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	SULT1A1	P50225	295 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522		Q6ZRM9	215 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	SLC35B3	Q9H1N7	401 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	URB1	O60287	2271 aa	Known RBP	12.93	□□□□□ -0.34
CALD1-222	ENST00000495522		A0A1B0GV50	99 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	RNF212B	A8MTL3	300 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	PSPN	O60542	156 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	IGKV1-5	P01602	117 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	ZNF16	P17020	682 aa	Predicted RBP	12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	NBL1	P41271	181 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	ACSF3	Q4G176	576 aa	Predicted RBP	12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	C11orf53	Q8IXP5	236 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	ZNF295-AS1	Q8N0V1	137 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	DRAM1	Q8N682	238 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	SMDT1	Q9H4I9	107 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	FBXO7	Q9Y3I1	522 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	WSB1	Q9Y6I7	421 aa		12.93	□□□□□ -0.34
CALD1-222	ENST00000495522	BTBD17	A6NE02	478 aa		12.92	□□□□□ -0.34
CALD1-222	ENST00000495522	C1QTNF9B	B2RNN3	333 aa		12.92	□□□□□ -0.34
CALD1-222	ENST00000495522	TIMM8A	O60220	97 aa	Predicted RBP	12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms