RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 AICDAQ9GZX7 198 aa3.38□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR51I1Q9H343 314 aa3.38□□□□□ -1.87
HMGB3P14-201ENST00000494195 ARMC7Q9H6L4 198 aa3.38□□□□□ -1.87
HMGB3P14-201ENST00000494195 ANKHQ9HCJ1 492 aa3.38□□□□□ -1.87
HMGB3P14-201ENST00000494195 RAB23Q9ULC3 237 aa3.38□□□□□ -1.87
HMGB3P14-201ENST00000494195 DENND4CQ5VZ89 1909 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CHD9Q3L8U1 2897 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 IRGMA1A4Y4 181 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 ZNF99A8MXY4 864 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 C4orf51C9J302 202 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 H3BSA7 217 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SLC22A1O15245 554 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 OPN1SWP03999 348 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 HMGN2P05204 90 aaKnown RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 HTR1AP08908 422 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CTSEP14091 401 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CPMP14384 443 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 NELFEP18615 380 aaKnown RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 RPS4Y1P22090 263 aaKnown RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CPN2P22792 545 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 ELK4P28324 431 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SNRPGP62308 76 aaKnown RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 BTN3A2P78410 334 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 PMS2P3Q13401 168 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 ILKQ13418 452 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 KIR2DS1Q14954 304 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 TPRG1LQ5T0D9 272 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SYT6Q5T7P8 510 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 C9orf135Q5VTT2 229 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 LAIR2Q6ISS4 152 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 TNFAIP8L2Q6P589 184 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 GALNT10Q86SR1 603 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 GKN2Q86XP6 184 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CLVS1Q8IUQ0 354 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 HS3ST5Q8IZT8 346 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CLDN22Q8N7P3 220 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 TMEM105Q8N8V8 129 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CDRT4Q8N9R6 151 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR7G2Q8NG99 324 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 GPR32P1Q8NGA4 272 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 FAM81AQ8TBF8 368 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SUN5Q8TC36 379 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 SLC37A2Q8TED4 501 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 RORBQ92753 470 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 C12orf43Q96C57 262 aaKnown RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 Q96MT0 163 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 COL21A1Q96P44 957 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 STACQ99469 402 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 UCK2Q9BZX2 261 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 PIGUQ9H490 435 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 NMNAT1Q9HAN9 279 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 FANCEQ9HB96 536 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 ACER3Q9NUN7 267 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 C14orf105Q9NVL8 296 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 FKBP14Q9NWM8 211 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 CLN6Q9NWW5 311 aa3.37□□□□□ -1.87
HMGB3P14-201ENST00000494195 ALPK3Q96L96 1907 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 COL4A2P08572 1712 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 KIR2DS1A0A191URI9 304 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 TLCD2A6NGC4 264 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CLDN24A6NM45 220 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 SMKR1H3BMG3 65 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 M0R3G1 203 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 FFAR1O14842 300 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CDC40O60508 579 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR5F1O95221 314 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 GPR75O95800 540 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 C1QCP02747 245 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CDK1P06493 297 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 DBIP07108 87 aaKnown RBP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR12D1P0DN82 309 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 LCN1P31025 176 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 HOXA6P31267 233 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CAPZBP47756 277 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR1E2P47887 323 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 SERPINB10P48595 397 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 XKP51811 444 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CRISP1P54107 249 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 PSMD4P55036 377 aaKnown RBP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 RAB38P57729 211 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 RAB8AP61006 207 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 PSPHP78330 225 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 CTAG1AP78358 180 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 EMX1Q04741 257 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 FUT5Q11128 374 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 FAM53BQ14153 422 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 TRAM2Q15035 370 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 ZNHIT3Q15649 155 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 NEDD8Q15843 81 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 ARHGAP11BQ3KRB8 267 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 C12orf73Q69YU5 71 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 RPL13AP3Q6NVV1 102 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 Q6ZS52 159 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 SLC7A5P1Q8MH63 180 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 BPIFB6Q8NFQ5 453 aa3.36□□□□□ -1.87
HMGB3P14-201ENST00000494195 OR10G6Q8NH81 332 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms