RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 XIAPP98170 497 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 APOFQ13790 326 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 TRIP13Q15645 432 aaPredicted RBP0.99□□□□□ -2.25
ITGB1-216ENST00000493758 CEACAM21Q3KPI0 293 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 HBMQ6B0K9 141 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 CLEC20AQ6ZU45 233 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 C10orf107Q8IVU9 208 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 ACBD4Q8NC06 268 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 OR4K17Q8NGC6 315 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 ZNF563Q8TA94 476 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 Q9BRP9 147 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 PRRG3Q9BZD7 231 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 RAB1BQ9H0U4 201 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 TMBIM4Q9HC24 238 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 KCNIP2Q9NS61 270 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 RMND1Q9NWS8 449 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 RBMX2Q9Y388 322 aaKnown RBP0.99□□□□□ -2.25
ITGB1-216ENST00000493758 RIMS1Q86UR5 1692 aaKnown RBP0.99□□□□□ -2.25
ITGB1-216ENST00000493758 SMARCA4P51532 1647 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 CFAP46Q8IYW2 2715 aa0.99□□□□□ -2.25
ITGB1-216ENST00000493758 XIRP1Q702N8 1843 aaKnown RBP0.99□□□□□ -2.25
ITGB1-216ENST00000493758 DMXL1Q9Y485 3027 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 RYR3Q15413 4870 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 SETD2Q9BYW2 2564 aaPredicted RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 SPTBN4Q9H254 2564 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 A0A1B0GW15 77 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 I3L4J1 428 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 GZMBP10144 247 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CPMP14384 443 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 S100A2P29034 98 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CBX5P45973 191 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 ETV1P50549 477 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 UBE2KP61086 200 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 HBG1P69891 147 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 HBG2P69892 147 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 ZNF117Q03924 483 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 C18orf21Q32NC0 220 aaPredicted RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 AADACL4Q5VUY2 407 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 SDIM1Q6ZPB5 146 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CCDC124Q96CT7 223 aaKnown RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 ZMYND19Q96E35 227 aaPredicted RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CAPZA3Q96KX2 299 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CATSPER2Q96P56 530 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 GOLPH3Q9H4A6 298 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 POMPQ9Y244 141 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 TBL2Q9Y4P3 447 aaKnown RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 MYO9AB2RTY4 2548 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 TEX15Q9BXT5 2789 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 TOPBP1Q92547 1522 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 CDK12Q9NYV4 1490 aaPredicted RBP0.98□□□□□ -2.25
ITGB1-216ENST00000493758 WDFY3Q8IZQ1 3526 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 WDR87Q6ZQQ6 2873 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 BCORL1Q5H9F3 1711 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 RTEL1-TNFRSF6BF6WH68 1400 aa0.98□□□□□ -2.25
ITGB1-216ENST00000493758 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 KIAA1109Q2LD37 5005 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 CFAP43Q8NDM7 1665 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 TTC28Q96AY4 2481 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 CELSR1Q9NYQ6 3014 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 HYDINQ4G0P3 5121 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 LOC100506127A0A0U1RQW1 187 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 SIGLEC16A6NMB1 481 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 A8MWP6 167 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 FABP7O15540 132 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 CCL2P13500 99 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 PYCR1P32322 319 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 HTR4Q13639 388 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 TRAM1Q15629 374 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 Q3ZCU0 254 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 FBXO48Q5FWF7 155 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 FAM162BQ5T6X4 162 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 LAMTOR1Q6IAA8 161 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 VN1R4Q7Z5H5 301 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 TMEM239Q8WW34 195 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 BCL2L14Q9BZR8 327 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 SMDT1Q9H4I9 107 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 METTL8Q9H825 291 aaKnown RBP0.97□□□□□ -2.25
ITGB1-216ENST00000493758 AGPAT3Q9NRZ7 376 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 CLEC2DQ9UHP7 191 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 NXT1Q9UKK6 140 aaKnown RBP0.97□□□□□ -2.25
ITGB1-216ENST00000493758 USH1CQ9Y6N9 552 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 ABCA2Q9BZC7 2435 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 COL4A1P02462 1669 aa0.97□□□□□ -2.25
ITGB1-216ENST00000493758 NBEAL2Q6ZNJ1 2754 aa0.96□□□□□ -2.25
ITGB1-216ENST00000493758 CRYBG3Q68DQ2 2970 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 LAMB2P55268 1798 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 SYNRGQ9UMZ2 1314 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 TRAV8-2A0A0B4J237 113 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 IGKV1-12A0A0C4DH73 117 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 A0A0G2JQZ4 141 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 ARGFXA6NJG6 315 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 FAM183AA6NL82 134 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 ZNF879B4DU55 563 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 FNDC10F2Z333 226 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 RNASEK-C17orf49H0YIS7 233 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 SNAP29O95721 258 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 LDOC1O95751 146 aaPredicted RBP0.96□□□□□ -2.26
ITGB1-216ENST00000493758 CST4P01036 141 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 IGKV1D-12P01611 117 aa0.96□□□□□ -2.26
ITGB1-216ENST00000493758 IGKV5-2P06315 115 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms