RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 INSL3P51460 131 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 RUNX1Q01196 453 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 GPR176Q14439 515 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 MMDQ15546 238 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 SMN1Q16637 294 aaKnown RBP13.51□□□□□ -0.25
COL9A1-210ENST00000493682 C6orf183Q5T699 404 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 STEAP3Q658P3 488 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 GAPTQ8N292 157 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 ZNF491Q8N8L2 437 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 SLC29A1Q99808 456 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 VSIG4Q9Y279 399 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 OGG1O15527 345 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 IGLV1-40P01703 118 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 RCC1P18754 421 aaPredicted RBP13.5□□□□□ -0.25
COL9A1-210ENST00000493682 GNB1P62873 340 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 ADARB1P78563 741 aaKnown RBP13.5□□□□□ -0.25
COL9A1-210ENST00000493682 TMPRSS11AQ6ZMR5 421 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 SMIM19Q96E16 107 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 MRPS24Q96EL2 167 aaKnown RBP13.5□□□□□ -0.25
COL9A1-210ENST00000493682 OR5B12Q96R08 314 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 PEX16Q9Y5Y5 336 aa13.5□□□□□ -0.25
COL9A1-210ENST00000493682 TRAV8-7A0A075B6U6 113 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 TRBV5-5A0A0J9YX44 114 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 FAM90A10PA6NDY2 464 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
COL9A1-210ENST00000493682 GPX5O75715 221 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 ACTBP60709 375 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 MORN2Q502X0 79 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 GHSRQ92847 366 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 MUL1Q969V5 352 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 RITA1Q96K30 269 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 OR51J1Q9H342 316 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 BABAM2Q9NXR7 383 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 CKLFQ9UBR5 152 aa13.49□□□□□ -0.25
COL9A1-210ENST00000493682 MRPS28Q9Y2Q9 187 aaKnown RBP13.49□□□□□ -0.25
COL9A1-210ENST00000493682 DYNC1I1O14576 645 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 LALBAP00709 142 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 CNTFRP26992 372 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 DCKP27707 260 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 GNMTQ14749 295 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 CASC10Q5T4H9 136 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 ZNF429Q86V71 674 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 ODF3L1Q8IXM7 274 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 DCUN1D4Q92564 292 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 CYYR1Q96J86 154 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 RCHY1Q96PM5 261 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 MRPL20Q9BYC9 149 aaKnown RBP13.48□□□□□ -0.25
COL9A1-210ENST00000493682 BANF2Q9H503 90 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 TAF9BQ9HBM6 251 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 ISYNA1Q9NPH2 558 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 PARP11Q9NR21 331 aa13.48□□□□□ -0.25
COL9A1-210ENST00000493682 IGHV7-81A0A0B4J1V7 117 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 TRAV41A0A0B4J266 112 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 CA11O75493 328 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 SC5DO75845 299 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 HLA-DRB1P01911 266 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 RAB9AP51151 201 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 RPS11P62280 158 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL9A1-210ENST00000493682 Q499Y3 187 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 DMKNQ6E0U4 476 aaPredicted RBP13.47□□□□□ -0.25
COL9A1-210ENST00000493682 C5orf24Q7Z6I8 188 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 JAGN1Q8N5M9 183 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 OR52L2PQ8NGH6 319 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 NABP2Q9BQ15 211 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 ZNF251Q9BRH9 671 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 ABHD14AQ9BUJ0 271 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 ANKRD60Q9BZ19 345 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 SELENOIQ9C0D9 397 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 MBNL3Q9NUK0 354 aaKnown RBP13.47□□□□□ -0.25
COL9A1-210ENST00000493682 CLEC2DQ9UHP7 191 aa13.47□□□□□ -0.25
COL9A1-210ENST00000493682 UBE2QL1A1L167 161 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 FAM90A7PA6NKC0 464 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 FAM90A23PA8MXZ1 464 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 OVOL1O14753 267 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 NBR2O15453 112 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 FSTP19883 344 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 BLVRBP30043 206 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-210ENST00000493682 PPP1CCP36873 323 aaKnown RBP13.46□□□□□ -0.25
COL9A1-210ENST00000493682 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 YIF1BQ5BJH7 314 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 SIGIRRQ6IA17 410 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 OVCH2Q7RTZ1 564 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 ZFP41Q8N8Y5 198 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 MINDY2Q8NBR6 621 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 RDH12Q96NR8 316 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 ALX4Q9H161 411 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-210ENST00000493682 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms