RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CLEC2LP0C7M8 214 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 SLC2A2P11168 524 aaPredicted RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 CD36P16671 472 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 GADD45AP24522 165 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 MYL9P24844 172 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 CEACAM3P40198 252 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 ZNF816Q0VGE8 651 aaPredicted RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 MADCAM1Q13477 382 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 Q3ZCU0 254 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 MORN2Q502X0 79 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 C6orf183Q5T699 404 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 SLC25A48Q6ZT89 311 aaKnown RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 Q6ZTK2 550 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 ZNF554Q86TJ5 538 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 THNSL2Q86YJ6 484 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 ODF3L1Q8IXM7 274 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 DRAM1Q8N682 238 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 WIPF2Q8TF74 440 aaPredicted RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 ARHGAP5-AS1Q96IT6 56 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 RBM14Q96PK6 669 aaKnown RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 OCSTAMPQ9BR26 566 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 URM1Q9BTM9 101 aaKnown RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 CENPOQ9BU64 300 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 NPFFR1Q9GZQ6 430 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 RANBP3Q9H6Z4 567 aaPredicted RBP5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 ZNF696Q9H7X3 374 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 LIN7BQ9HAP6 207 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 RAB18Q9NP72 206 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 PLEKHJ1Q9NW61 149 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 PITPNC1Q9UKF7 332 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 RAB22AQ9UL26 194 aa5.74□□□□□ -1.49
PDLIM1-204ENST00000492511 IGHV1-3A0A0C4DH29 117 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 SH2D7A6NKC9 451 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 NOTOA8MTQ0 251 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 ZNF736B4DX44 427 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 RAB27BO00194 218 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 YPEL1O60688 119 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR2F2O95006 317 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 SNRNP70P08621 437 aaKnown RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 RAB6AP20340 208 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 BRS3P32247 399 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 SDC2P34741 201 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 PPP1CCP36873 323 aaKnown RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 TGFBR1P36897 503 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 REG1BP48304 166 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 RAB7AP51149 207 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 ZNF137PP52743 207 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 HTD2P86397 168 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 EBI3Q14213 229 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 PRR31Q5SQ13 230 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 LY6G6FQ5SQ64 297 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 TRAT1Q6PIZ9 186 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 TPRA1Q86W33 373 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR8H3Q8N146 312 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 TSPAN14Q8NG11 270 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR4C13Q8NGP0 309 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR10X1Q8NGY0 326 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR56B4Q8NH76 319 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 CAPSLQ8WWF8 208 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 RTN4IP1Q8WWV3 396 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 TOMM40LQ969M1 308 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 RPEQ96AT9 228 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 YIPF6Q96EC8 236 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 YPEL2Q96QA6 119 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 CHCHD6Q9BRQ6 235 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 SLC25A33Q9BSK2 321 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 WNT10AQ9GZT5 417 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 PARP12Q9H0J9 701 aaKnown RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 Q9N2K0 584 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 OR2S2Q9NQN1 319 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 GNG12Q9UBI6 72 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 ELF5Q9UKW6 265 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 SSR3Q9UNL2 185 aa5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 AMMECR1Q9Y4X0 333 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1-204ENST00000492511 KIAA2026Q5HYC2 2103 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 A0A087WXM4 84 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 IGHV3-72A0A0B4J1Y9 119 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 IGKV1-6A0A0C4DH72 117 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 MFNGO00587 321 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 HSD17B6O14756 317 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 KCNAB3O43448 404 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 TNFAIP8O95379 198 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 GAPDHP04406 335 aaKnown RBP5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 SCTP09683 121 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 FAM106CPP0CH98 169 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 SNRPBP14678 240 aaKnown RBP5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 GNB3P16520 340 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 MNDAP41218 407 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 MXD1Q05195 221 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 HNF4GQ14541 408 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 TMEM95Q3KNT9 176 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 TMEM30BQ3MIR4 351 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 PDLIM3Q53GG5 364 aaPredicted RBP5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 STEAP3Q658P3 488 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 CCDC144NLQ6NUI1 221 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 SFXN4Q6P4A7 337 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 C16orf82Q7Z2V1 217 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 MOB3BQ86TA1 216 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 Q8N6K4 173 aa5.72□□□□□ -1.49
PDLIM1-204ENST00000492511 KLHDC1Q8N7A1 406 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms