RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 MCRIP1C9JLW8 97 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 LANCL1O43813 399 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 IGLV1-40P01703 118 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 RCC1P18754 421 aaPredicted RBP12.32□□□□□ -0.44
PLOD3-216ENST00000489927 ETV1P50549 477 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 RIPK1Q13546 671 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 C6orf183Q5T699 404 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 OR2G6Q5TZ20 316 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 GAPTQ8N292 157 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 OR13C5Q8NGS8 318 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 RAB9BQ9NP90 201 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 ISYNA1Q9NPH2 558 aa12.32□□□□□ -0.44
PLOD3-216ENST00000489927 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 LOC100130705A0A1B0GUX0 176 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 ATP6V0E1O15342 81 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 IGFBP3P17936 291 aaPredicted RBP12.31□□□□□ -0.44
PLOD3-216ENST00000489927 CNTFRP26992 372 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 ACTBP60709 375 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 ADARB1P78563 741 aaKnown RBP12.31□□□□□ -0.44
PLOD3-216ENST00000489927 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
PLOD3-216ENST00000489927 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 RAB12Q6IQ22 244 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 ZNF429Q86V71 674 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
PLOD3-216ENST00000489927 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
PLOD3-216ENST00000489927 IGHV7-81A0A0B4J1V7 117 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 TRAV41A0A0B4J266 112 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 OVOL1O14753 267 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 OGG1O15527 345 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 HLA-DRB1P01911 266 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 RAB9AP51151 201 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 GPR176Q14439 515 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 GNMTQ14749 295 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 MORN2Q502X0 79 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 GLIPR1L1Q6UWM5 242 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 OVCH2Q7RTZ1 564 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 ODF3L1Q8IXM7 274 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 MUL1Q969V5 352 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 SLC29A1Q99808 456 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
PLOD3-216ENST00000489927 TAF9BQ9HBM6 251 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 FAM53CQ9NYF3 392 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 MRPS28Q9Y2Q9 187 aaKnown RBP12.3□□□□□ -0.44
PLOD3-216ENST00000489927 PEX16Q9Y5Y5 336 aa12.3□□□□□ -0.44
PLOD3-216ENST00000489927 TRAV8-7A0A075B6U6 113 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 TRBV5-5A0A0J9YX44 114 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 SAP30O75446 220 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 GPX5O75715 221 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 SC5DO75845 299 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 LALBAP00709 142 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
PLOD3-216ENST00000489927 TRAT1Q6PIZ9 186 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 TMPRSS11AQ6ZMR5 421 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 MINDY2Q8NBR6 621 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 OR52L2PQ8NGH6 319 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 GHSRQ92847 366 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 MRPS24Q96EL2 167 aaKnown RBP12.29□□□□□ -0.44
PLOD3-216ENST00000489927 NABP2Q9BQ15 211 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 ZNF251Q9BRH9 671 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 ABHD14AQ9BUJ0 271 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
PLOD3-216ENST00000489927 BABAM2Q9NXR7 383 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 LYSTQ99698 3801 aa12.29□□□□□ -0.44
PLOD3-216ENST00000489927 NBR2O15453 112 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 CA11O75493 328 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 WBP4O75554 376 aaKnown RBP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 SPNP16150 400 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 DCKP27707 260 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 SLURP1P55000 103 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 RPS11P62280 158 aaKnown RBP eCLIP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 GABPB1Q06547 395 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 ZFP1Q6P2D0 407 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 DLX4Q92988 240 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 C9orf16Q9BUW7 83 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 BANF2Q9H503 90 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 MBNL3Q9NUK0 354 aaKnown RBP12.28□□□□□ -0.44
PLOD3-216ENST00000489927 STARD9Q9P2P6 4700 aa12.28□□□□□ -0.44
PLOD3-216ENST00000489927 A0A1W2PPK0 400 aa12.27□□□□□ -0.45
PLOD3-216ENST00000489927 UBE2QL1A1L167 161 aa12.27□□□□□ -0.45
PLOD3-216ENST00000489927 SOX15O60248 233 aa12.27□□□□□ -0.45
PLOD3-216ENST00000489927 GP9P14770 177 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms