RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 DBTP11182 482 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF44P15621 663 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 GABRB1P18505 474 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 ATP6V1E1P36543 226 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 MNDAP41218 407 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 SOX2P48431 317 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 ALKBH1Q13686 389 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 KISS1Q15726 138 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 ANXA2RQ3ZCQ2 193 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 KIAA2026Q5HYC2 2103 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 RSBN1Q5VWQ0 802 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR8H3Q8N146 312 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR2C3Q8N628 320 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 COMMD1Q8N668 190 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 Q8N6K4 173 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 ACBD7Q8N6N7 88 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 PXT1Q8NFP0 134 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR10A7Q8NGE5 316 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR51D1Q8NGF3 324 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR5D18Q8NGL1 313 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR5D14Q8NGL3 314 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 OR13C9Q8NGT0 318 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 CNIH3Q8TBE1 160 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 RPEQ96AT9 228 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 MCRIP2Q9BUT9 160 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 CALYQ9NYX4 217 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 IDI2-AS1Q9NZ38 188 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 MSRB1Q9NZV6 116 aa4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 LSM4Q9Y4Z0 139 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-210ENST00000489741 DAPL1A0PJW8 107 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 E9PI62 339 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 H0YJX3 145 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 J3QLW9 94 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 SULT1B1O43704 296 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 TOMM40O96008 361 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ALPLP05186 524 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 HTR1AP08908 422 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 FCGR1AP12314 374 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF19P17023 458 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 NFYBP25208 207 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 KCNJ3P48549 501 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 RAB7AP51149 207 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 SCN1BQ07699 218 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF816Q0VGE8 651 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 MADCAM1Q13477 382 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 IL13RA2Q14627 380 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ATXN7L3Q14CW9 347 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 NHLRC3Q5JS37 347 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 C9orf152Q5JTZ5 239 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF691Q5VV52 312 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 MEDAGQ5VYS4 303 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 FAM220AQ7Z4H9 259 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 SERPINA12Q8IW75 414 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 SYS1Q8N2H4 156 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 STPG2Q8N412 459 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 LINC00311Q8N616 119 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 DRAM1Q8N682 238 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 Q8N9W7 124 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 TMEM104Q8NE00 496 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 OR13C3Q8NGS6 347 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 OR56B4Q8NH76 319 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 PLPPR1Q8TBJ4 325 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 HAVCR2Q8TDQ0 301 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 LEAP2Q969E1 77 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 TOMM40LQ969M1 308 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ST6GALNAC6Q969X2 333 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 LGALS12Q96DT0 336 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ABHD14AQ9BUJ0 271 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 BARHL1Q9BZE3 327 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ABCG5Q9H222 651 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ISG20L2Q9H9L3 353 aaKnown RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF581Q9P0T4 197 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 KIF25Q9UIL4 384 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 LINC00527Q9UJ94 153 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 AMMECR1Q9Y4X0 333 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 DNAH7Q8WXX0 4024 aa4.97□□□□□ -1.61
PRPF40A-210ENST00000489741 TENM2Q9NT68 2774 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 MEIKINA0A087WXM9 373 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 IGHV1-3A0A0C4DH29 117 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM212A6NML5 194 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 SERPINE3A8MV23 424 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 C15orf65H3BRN8 121 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 CCL24O00175 119 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 CCRL2O00421 344 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 RAMP3O60896 148 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 NDUFB8O95169 186 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 IGKV1D-33P01593 117 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 IGKV1-33P01594 117 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 IGHV3-7P01780 117 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 CCDC159P0C7I6 412 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM11P17152 192 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 GZMHP20718 246 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 CD1BP29016 333 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 VHLP40337 213 aa4.96□□□□□ -1.62
PRPF40A-210ENST00000489741 GLP1RP43220 463 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms