RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ODF3BA8MYP8 253 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 NPIPB11E5RHQ5 1161 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 C15orf65H3BRN8 121 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 H3BUI4 141 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 SHOXO15266 292 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 HOXA3O43365 443 aaPredicted RBP6.38□□□□□ -1.39
SSR1-210ENST00000489567 IGHV3-7P01780 117 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 MELTFP08582 738 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 SNRPBP14678 240 aaKnown RBP6.38□□□□□ -1.39
SSR1-210ENST00000489567 RCC1P18754 421 aaPredicted RBP6.38□□□□□ -1.39
SSR1-210ENST00000489567 VEGFCP49767 419 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 BAMBIQ13145 260 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 SLC9A3R2Q15599 337 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 LTC4SQ16873 150 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 PLAC9Q5JTB6 97 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 OLFML2AQ68BL7 652 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 ZNF626Q68DY1 528 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 SFXN4Q6P4A7 337 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 Q6YL49 198 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 SLC16A12Q6ZSM3 486 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 TPRA1Q86W33 373 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 OR11H6Q8NGC7 330 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 TAF15Q92804 592 aaKnown RBP eCLIP6.38□□□□□ -1.39
SSR1-210ENST00000489567 KIRREL1Q96J84 757 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 TMEM133Q9H2Q1 129 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 GAL3ST2Q9H3Q3 398 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 ZNF286AQ9HBT8 521 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 TNFRSF19Q9NS68 423 aa6.38□□□□□ -1.39
SSR1-210ENST00000489567 IL1AP01583 271 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 IGHV4-59P01825 116 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 ARG1P05089 322 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 GLAP06280 429 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 RPS19P39019 145 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 ALDH3B2P48448 385 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 NCS1P62166 190 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 UBA52P62987 128 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 RBM39Q14498 530 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 TIMM50Q3ZCQ8 353 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 MIDNQ504T8 468 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 RBMS3Q6XE24 437 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 GDPGP1Q6ZNW5 385 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 ABHD12Q8N2K0 398 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 OR13D1Q8NGV5 346 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 MRPL30Q8TCC3 161 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 LEAP2Q969E1 77 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 ARHGAP5-AS1Q96IT6 56 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 NEDD4LQ96PU5 975 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 HDHD3Q9BSH5 251 aaPredicted RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 URM1Q9BTM9 101 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 GON7Q9BXV9 100 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 MRPS26Q9BYN8 205 aaKnown RBP6.37□□□□□ -1.39
SSR1-210ENST00000489567 RAB22AQ9UL26 194 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 KCNK7Q9Y2U2 307 aa6.37□□□□□ -1.39
SSR1-210ENST00000489567 C12orf77C9JDV5 145 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 TRIM77I1YAP6 450 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 RAB27BO00194 218 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 NFYBP25208 207 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IER3P46695 156 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 AP2S1P53680 142 aaPredicted RBP6.36□□□□□ -1.39
SSR1-210ENST00000489567 LINC01559Q495D7 138 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 LIAT1Q6ZQX7 453 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 LDLRAD3Q86YD5 345 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.36□□□□□ -1.39
SSR1-210ENST00000489567 OR4P4Q8NGL7 312 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 OR5H6Q8NGV6 325 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 LGALS14Q8TCE9 139 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 ARL11Q969Q4 196 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 CLEC7AQ9BXN2 247 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 PECRQ9BY49 303 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
SSR1-210ENST00000489567 PLEKHJ1Q9NW61 149 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IDI2-AS1Q9NZ38 188 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 AK3Q9UIJ7 227 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 TRAPPC2LQ9UL33 140 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 FAM96BQ9Y3D0 163 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 A0A087X0M5 115 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IGHV3-43A0A0B4J1X8 118 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 A0A1B0GX30 115 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 RNF212BA8MTL3 300 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 NAPSAO96009 420 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IGLV1-47P01700 117 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 FBP1P09467 338 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IGHV3-43DP0DP04 118 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 RAB6AP20340 208 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 GZMHP20718 246 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 CD34P28906 385 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 LOXL3P58215 753 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 CTF1Q16619 201 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 IDNKQ5T6J7 187 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 GPR107Q5VW38 600 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 Q6ZTK2 550 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 OVCH2Q7RTZ1 564 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 PRR18Q8N4B5 295 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 BEND2Q8NDZ0 799 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 OR1L1Q8NH94 360 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 JMJD8Q96S16 334 aa6.36□□□□□ -1.39
SSR1-210ENST00000489567 C19orf24Q9BVV8 132 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms