RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OR10K2Q6IF99 312 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 Q6ZPA2 131 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 TGIF2LXQ8IUE1 241 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 MRPL30Q8TCC3 161 aaKnown RBP18.18■□□□□ 0.5
COL9A3-213ENST00000489045 MBNL3Q9NUK0 354 aaKnown RBP18.18■□□□□ 0.5
COL9A3-213ENST00000489045 NECAP2Q9NVZ3 263 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 DNAH3Q8TD57 4116 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 ZNF736B4DX44 427 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-213ENST00000489045 TXNL1O43396 289 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 CD1BP29016 333 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 SLC35A2P78381 396 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 IRF3Q14653 427 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 GNMTQ14749 295 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 HSD17B12Q53GQ0 312 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 C1orf100Q5SVJ3 147 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 CEACAM19Q7Z692 300 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 C5orf24Q7Z6I8 188 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 FOXRED2Q8IWF2 684 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 KCNK15Q9H427 330 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 KCNIP1Q9NZI2 227 aa18.17■□□□□ 0.5
COL9A3-213ENST00000489045 MOSP00540 346 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 SRMP19623 302 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 CHATP28329 748 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 LIPKQ5VXJ0 399 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 FOXB2Q5VYV0 432 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 Q8N9W7 124 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 UFD1Q92890 307 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 RBMXL1Q96E39 390 aaKnown RBP18.16■□□□□ 0.5
COL9A3-213ENST00000489045 NEDD4LQ96PU5 975 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 TMEM59Q9BXS4 323 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 OR2S2Q9NQN1 319 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 LIN7CQ9NUP9 197 aaKnown RBP18.16■□□□□ 0.5
COL9A3-213ENST00000489045 AURKAIP1Q9NWT8 199 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-213ENST00000489045 TPRKBQ9Y3C4 175 aa18.16■□□□□ 0.5
COL9A3-213ENST00000489045 LINC01548A6NM66 108 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 GPR12P47775 334 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 RPL23AP62750 156 aaKnown RBP18.15■□□□□ 0.5
COL9A3-213ENST00000489045 RPS27AP62979 156 aaKnown RBP18.15■□□□□ 0.5
COL9A3-213ENST00000489045 SLC35B1P78383 322 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 MORN2Q502X0 79 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 ZNF554Q86TJ5 538 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 STPG2Q8N412 459 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 OR52L2PQ8NGH6 319 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 MRAPQ8TCY5 172 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 SULT4A1Q9BR01 284 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 ABCG5Q9H222 651 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 PLSCR3Q9NRY6 295 aa18.15■□□□□ 0.5
COL9A3-213ENST00000489045 UCHL1P09936 223 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 PPP1CCP36873 323 aaKnown RBP18.14■□□□□ 0.49
COL9A3-213ENST00000489045 UNC119Q13432 240 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 STEAP3Q658P3 488 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 C6orf201Q7Z4U5 140 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 KCNG3Q8TAE7 436 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 TMEM203Q969S6 136 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 NICN1Q9BSH3 213 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 FAAP24Q9BTP7 215 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 JPT1Q9UK76 154 aa18.14■□□□□ 0.49
COL9A3-213ENST00000489045 AP4M1O00189 453 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 SLC22A1O15245 554 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 MYF6P23409 242 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 HTR2CP28335 458 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 ETV3LQ6ZN32 361 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 C18orf65Q6ZTR6 163 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 OR2W3Q7Z3T1 314 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 RCC1LQ96I51 464 aaKnown RBP18.13■□□□□ 0.49
COL9A3-213ENST00000489045 S1PR3Q99500 378 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 ABHD14AQ9BUJ0 271 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 TM2D1Q9BX74 207 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 DUSP21Q9H596 190 aa18.13■□□□□ 0.49
COL9A3-213ENST00000489045 RGS10O43665 173 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 LANCL1O43813 399 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 HSMCR30P0CW71 290 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 RPS25P62851 125 aaKnown RBP18.12■□□□□ 0.49
COL9A3-213ENST00000489045 QRFPP83859 136 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 HTD2P86397 168 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 LSAMPQ13449 338 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 TMEM91Q6ZNR0 172 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 COMMD1Q8N668 190 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 LINC00482Q8N8I6 264 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 OR51D1Q8NGF3 324 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 OR8H1Q8NGG4 311 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 OR6M1Q8NGM8 313 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 RASL11BQ9BPW5 248 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 ANKRD60Q9BZ19 345 aa18.12■□□□□ 0.49
COL9A3-213ENST00000489045 TMEM14DPA8MWL7 114 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 NUDT19A8MXV4 375 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 BPNT1O95861 308 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 CD37P11049 281 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 F2RL1P55085 397 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 TPBGQ13641 420 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 HMGN3Q15651 99 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 C8orf86Q6ZUL3 223 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 ODF3L1Q8IXM7 274 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 FAM71E2Q8N5Q1 922 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 KLHL30-AS1Q8NEE0 82 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 ZFP57Q9NU63 452 aa18.11■□□□□ 0.49
COL9A3-213ENST00000489045 A0A0A6YYD4 124 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 YPEL1O60688 119 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 THBS3P49746 956 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 MRPL41Q8IXM3 137 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms