RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 HEATR1Q9H583 2144 aaKnown RBP11.31□□□□□ -0.6
CHD1L-208ENST00000488864 K7N7A8 449 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 FAHP16930 419 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
CHD1L-208ENST00000488864 CHRNB4P30926 498 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 FAAP24Q9BTP7 215 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 TM2D1Q9BX74 207 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 DECR2Q9NUI1 292 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 PLEKHJ1Q9NW61 149 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 ANXA10Q9UJ72 324 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 ZG16O60844 167 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 APLNRP35414 380 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 PHLDA2Q53GA4 152 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 GFI1BQ5VTD9 330 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 Q8WTZ3 238 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 NAA60Q9H7X0 242 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
CHD1L-208ENST00000488864 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
CHD1L-208ENST00000488864 H3BQ15 152 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 NGFP01138 241 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 ALDH3B1P43353 468 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 ZNF83P51522 516 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 CEBPGP53567 150 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 FXYD4P59646 89 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 C17orf78Q8N4C9 275 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 GAR1Q9NY12 217 aaKnown RBP11.29□□□□□ -0.6
CHD1L-208ENST00000488864 URGCP-MRPS24S4R325 110 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 A0A1B0GW64 132 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 S100A2P29034 98 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 ECI1P42126 302 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 DEFA6Q01524 100 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 ELOBQ15370 118 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 OR10D4PQ8NGN7 298 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 OR11L1Q8NGX0 322 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
CHD1L-208ENST00000488864 DYRK2Q92630 601 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 PRDM13Q9H4Q3 707 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
CHD1L-208ENST00000488864 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 RBFOX3A6NFN3 312 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 H0YL77 283 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 HSD17B6O14756 317 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ZNF728P0DKX0 622 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 TAGLN2P37802 199 aaKnown RBP11.28□□□□□ -0.6
CHD1L-208ENST00000488864 PPA1Q15181 289 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 KRTAP27-1Q3LI81 207 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 FBXW12Q6X9E4 464 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 DPPA2Q7Z7J5 298 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 S100A13Q99584 98 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ELOVL5Q9NYP7 299 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ICE1Q9Y2F5 2266 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
CHD1L-208ENST00000488864 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ZNF850A8MQ14 1090 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 CECR9P0C854 216 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 RNF224P0DH78 156 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 WNT5AP41221 380 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 ABCA11PQ4W5N1 156 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 BOD1Q96IK1 185 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
CHD1L-208ENST00000488864 M0R1B8 84 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 ANGPTL7O43827 346 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BKO60814 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 CA11O75493 328 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 IGLV3-1P01715 115 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BJP06899 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 SOD3P08294 240 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 SRP19P09132 144 aaKnown RBP11.27□□□□□ -0.6
CHD1L-208ENST00000488864 COX5BP10606 129 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BOP23527 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BBP33778 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BDP58876 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 RND3P61587 244 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BCP62807 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST2H2BEQ16778 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.27□□□□□ -0.6
CHD1L-208ENST00000488864 SPATA46Q5T0L3 261 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 LFNGQ8NES3 379 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BHQ93079 126 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms