RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TRGV4A0A0C4DH28 118 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 ZNF189O75820 626 aaPredicted RBP1.28□□□□□ -2.2
CD46-215ENST00000488596 SOD1P00441 154 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 OR4A8P0C604 315 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 ADORA1P30542 326 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 HTR4Q13639 388 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 PDK2Q15119 407 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 USF2Q15853 346 aaPredicted RBP1.28□□□□□ -2.2
CD46-215ENST00000488596 MAPK14Q16539 360 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 TRMT12Q53H54 448 aaKnown RBP1.28□□□□□ -2.2
CD46-215ENST00000488596 SPIN4Q56A73 249 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 CENPWQ5EE01 88 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 SYCE1Q8N0S2 351 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 C17orf78Q8N4C9 275 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 ZFAND2AQ8N6M9 145 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 ANGPTL6Q8NI99 470 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 GPR119Q8TDV5 335 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.28□□□□□ -2.2
CD46-215ENST00000488596 BBS2Q9BXC9 721 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 ASCL3Q9NQ33 180 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 USP42Q9H9J4 1324 aaKnown RBP1.28□□□□□ -2.2
CD46-215ENST00000488596 VWDEQ8N2E2 1590 aa1.28□□□□□ -2.2
CD46-215ENST00000488596 COL5A3P25940 1745 aaPredicted RBP1.28□□□□□ -2.2
CD46-215ENST00000488596 ZNF638Q14966 1978 aaKnown RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 STRCP1A6NGW2 1772 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 CLUHO75153 1309 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 FAM25EA8MYX2 175 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 C9J4A7 227 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 OVOL1O14753 267 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 PHYHO14832 338 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 TRAPPC3O43617 180 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 CYTH3O43739 400 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 PPP1CCP36873 323 aaKnown RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 DLX6P56179 175 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 ACTBP60709 375 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 RAB8AP61006 207 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 ACTG1P63261 375 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 DEFB103AP81534 67 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 PMS2P3Q13401 168 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 ZNHIT3Q15649 155 aaPredicted RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 TMEM176BQ3YBM2 270 aaPredicted RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 ACSBG2Q5FVE4 666 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 RBM48Q5RL73 367 aaKnown RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 MTERF4Q7Z6M4 381 aaKnown RBP1.27□□□□□ -2.21
CD46-215ENST00000488596 TMEM75Q8N9X5 138 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 Q8NDZ9 215 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 ATP6V1C2Q8NEY4 427 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 OR4C16Q8NGL9 310 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 TAMM41Q96BW9 452 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 MED18Q9BUE0 208 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 GTSF1LQ9H1H1 148 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 TMEM106BQ9NUM4 274 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 CCL26Q9Y258 94 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 MINOS1-NBL1R4GNA1 71 aa1.27□□□□□ -2.21
CD46-215ENST00000488596 LRPPRCP42704 1394 aaKnown RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 PTPRJQ12913 1337 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 A0A0J9YX75 114 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 ERICH4A6NGS2 130 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 TRPC5OSA6NMA1 111 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 IQCF5A8MTL0 148 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 ODF3BA8MYP8 253 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 HSBP1L1C9JCN9 74 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 M0QYV0 167 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 DENRO43583 198 aaKnown RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 UGT2B11O75310 529 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 FBP1P09467 338 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 ZNF7P17097 686 aaPredicted RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 PVALBP20472 110 aaPredicted RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 BLVRBP30043 206 aaPredicted RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 KDELR2P33947 212 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 SPAM1P38567 509 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 PSMB3P49720 205 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 FAM3AP98173 230 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 GTF2BQ00403 316 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 SLAMF1Q13291 335 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 HES1Q14469 280 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 TIMM23BQ5SRD1 257 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 ERMNQ8TAM6 284 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 PPWD1Q96BP3 646 aaKnown RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 KLF6Q99612 283 aaPredicted RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 ACBD6Q9BR61 282 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 UPK3BQ9BT76 320 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 MED10Q9BTT4 135 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 OR52A5Q9H2C5 316 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 C16orf95Q9H693 158 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 TMEM216Q9P0N5 145 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 DNAJC12Q9UKB3 198 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 SCML1Q9UN30 329 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 MRPS16Q9Y3D3 137 aaKnown RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 HEY1Q9Y5J3 304 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 PLXNA3P51805 1871 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 COL11A1P12107 1806 aaPredicted RBP1.26□□□□□ -2.21
CD46-215ENST00000488596 COL4A2P08572 1712 aa1.26□□□□□ -2.21
CD46-215ENST00000488596 SLIT2O94813 1529 aa1.25□□□□□ -2.21
CD46-215ENST00000488596 MAP3K19Q56UN5 1328 aa1.25□□□□□ -2.21
CD46-215ENST00000488596 ERICH2A1L162 156 aa1.25□□□□□ -2.21
CD46-215ENST00000488596 F5H5K5 113 aa1.25□□□□□ -2.21
CD46-215ENST00000488596 MKRN2OSH3BPM6 223 aa1.25□□□□□ -2.21
CD46-215ENST00000488596 ADAP1O75689 374 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms